DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)
DGD is a Ligand Of Interest in 4TNJ designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4TNJ_DGD_B_620 | 30% | 40% | 0.169 | 0.917 | 0.89 | 1.34 | 1 | 8 | 2 | 0 | 88% | 1 |
| 4TNJ_DGD_a_411 | 27% | 39% | 0.157 | 0.89 | 0.93 | 1.39 | 1 | 8 | 4 | 0 | 85% | 1 |
| 4TNJ_DGD_C_515 | 24% | 40% | 0.165 | 0.898 | 0.97 | 1.27 | 2 | 6 | 3 | 0 | 80% | 1 |
| 4TNJ_DGD_C_517 | 22% | 40% | 0.168 | 0.845 | 0.87 | 1.4 | - | 9 | 5 | 0 | 100% | 1 |
| 4TNJ_DGD_A_408 | 21% | 39% | 0.169 | 0.872 | 0.92 | 1.4 | - | 8 | 1 | 0 | 85% | 1 |
| 4TNJ_DGD_c_515 | 20% | 40% | 0.185 | 0.904 | 0.95 | 1.28 | 1 | 7 | 3 | 0 | 80% | 1 |
| 4TNJ_DGD_C_516 | 16% | 38% | 0.158 | 0.801 | 0.9 | 1.43 | 1 | 13 | 5 | 0 | 94% | 1 |
| 4TNJ_DGD_b_624 | 16% | 40% | 0.199 | 0.881 | 0.9 | 1.33 | 1 | 6 | 3 | 0 | 88% | 1 |
| 4TNJ_DGD_c_517 | 15% | 40% | 0.207 | 0.855 | 0.87 | 1.39 | - | 9 | 5 | 0 | 100% | 1 |
| 4TNJ_DGD_b_601 | 12% | 38% | 0.18 | 0.83 | 1.05 | 1.33 | 3 | 7 | 4 | 0 | 79% | 1 |
| 4TNJ_DGD_c_516 | 10% | 38% | 0.213 | 0.832 | 0.91 | 1.43 | 2 | 12 | 4 | 0 | 94% | 1 |
| 4TNJ_DGD_d_408 | 8% | 40% | 0.195 | 0.773 | 0.91 | 1.34 | 2 | 9 | 1 | 0 | 95% | 1 |
| 4TNJ_DGD_B_625 | 7% | 38% | 0.177 | 0.767 | 1.06 | 1.33 | 3 | 7 | 3 | 0 | 79% | 1 |
| 4TNJ_DGD_D_409 | 4% | 40% | 0.208 | 0.722 | 0.9 | 1.33 | - | 9 | 3 | 0 | 95% | 1 |
| 5V2C_DGD_C_516 | 91% | 41% | 0.047 | 0.983 | 0.91 | 1.29 | 5 | 10 | 0 | 0 | 94% | 1 |
| 5GTI_DGD_h_103 | 86% | 49% | 0.05 | 0.967 | 0.9 | 0.97 | 3 | 3 | 0 | 0 | 94% | 1 |
| 5GTH_DGD_h_102 | 85% | 48% | 0.05 | 0.966 | 0.9 | 1.03 | 4 | 5 | 0 | 0 | 94% | 1 |
| 8IRF_DGD_C_517 | 81% | 45% | 0.06 | 0.963 | 0.84 | 1.2 | 2 | 6 | 1 | 0 | 94% | 0.5 |
| 3WU2_DGD_C_518 | 80% | 43% | 0.063 | 0.965 | 0.79 | 1.31 | 3 | 9 | 0 | 0 | 94% | 1 |
| 7M76_DGD_L_207 | 93% | 41% | 0.05 | 0.984 | 1.05 | 1.18 | 3 | 7 | 3 | 0 | 100% | 1 |
| 1PPR_DGD_O_625 | 82% | 51% | 0.066 | 0.965 | 0.78 | 0.96 | 1 | 5 | 2 | 0 | 100% | 1 |
