4GDI | pdb_00004gdi


NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

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NAG is a Ligand Of Interest in 4GDI designated by the RCSB
Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
4GDI_NAG_E_505 34% 57% 0.125 0.8460.62 0.85 - -10100%1
4GDI_NAG_F_505 29% 60% 0.142 0.8470.57 0.77 - -00100%1
4GDI_NAG_F_506 21% 58% 0.14 0.7930.51 0.89 - 100100%1
4GDI_NAG_B_508 14% 61% 0.146 0.7510.53 0.77 - -00100%1
4GDI_NAG_D_504 11% 47% 0.182 0.780.53 1.38 - 100100%1
4GDI_NAG_A_507 10% 52% 0.163 0.7350.41 1.26 - 200100%1
4GDI_NAG_A_508 8% 56% 0.186 0.7430.57 0.95 - -00100%1
4GDI_NAG_C_505 7% 59% 0.197 0.7470.56 0.84 - -00100%1
4GDI_NAG_B_507 6% 54% 0.215 0.7640.62 0.98 - -00100%1
4GDI_NAG_C_506 5% 50% 0.2 0.7140.65 1.16 - 200100%1
4GDI_NAG_E_508 5% 47% 0.185 0.6810.68 1.24 - 200100%1
4GDI_NAG_D_505 3% 52% 0.209 0.6540.58 1.13 - 100100%1
4GDI_NAG_A_506 2% 54% 0.257 0.7060.5 1.09 - 100100%1
4GEZ_NAG_C_502 98% 53% 0.029 0.9880.6 1.03 - 110100%1
4FVK_NAG_A_505 47% 42% 0.092 0.8540.38 1.75 - 400100%1
4GDJ_NAG_A_506 9% 64% 0.21 0.8090.46 0.73 - -00100%1
2QFR_NAG_B_451 100% 63% 0.013 0.9980.49 0.72 - 100100%1
5LDS_NAG_C_1003 100% 65% 0.016 0.9970.54 0.62 - -30100%1
7DDF_NAG_B_401 100% 84% 0.016 0.9960.21 0.49 - -00100%1
2HQM_NAG_A_1301 100% 61% 0.018 0.9960.59 0.7 - -00100%1
3THD_NAG_B_702 100% 48% 0.019 0.9950.71 1.18 - -00100%1