UDP: URIDINE-5'-DIPHOSPHATE

UDP is a Ligand Of Interest in 3O3C designated by the RCSB


Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
3O3C_UDP_A_901 28% 31% 0.273 0.9281.09 1.62 2 620100%1
3O3C_UDP_C_901 27% 31% 0.261 0.9080.95 1.76 1 740100%1
3O3C_UDP_B_901 24% 31% 0.279 0.9131.01 1.7 - 620100%1
3O3C_UDP_D_901 24% 31% 0.29 0.9230.94 1.76 - 730100%1
4KQM_UDP_D_801 80% 33% 0.125 0.9760.92 1.69 1 600100%1
5UW0_UDP_D_801 67% 33% 0.134 0.9431.01 1.64 2 600100%1
5UW4_UDP_C_802 65% 40% 0.161 0.9630.96 1.36 1 510100%1
5VNC_UDP_D_801 58% 33% 0.145 0.9251.1 1.56 3 500100%1
5SUL_UDP_A_801 54% 29% 0.18 0.9440.99 1.81 1 710100%1
8X3Q_UDP_C_401 100% 3% 0.015 0.9983.32 2.69 13 1300100%1
8X3U_UDP_B_401 100% 3% 0.012 0.9993.31 2.68 13 1320100%1
8VH8_UDP_C_704 100% 62% 0.032 0.9950.55 0.9 - 100100%1
2IV7_UDP_A_1372 100% 40% 0.035 0.9840.85 1.49 - 400100%1
4PHR_UDP_A_301 100% 42% 0.042 0.9890.84 1.41 - 400100%1