GDU: GALACTOSE-URIDINE-5'-DIPHOSPHATE
GDU is a Ligand Of Interest in 3HDY designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3HDY_GDU_G_500 | 71% | 2% | 0.085 | 0.948 | 2.68 | 3.58 | 4 | 18 | 2 | 0 | 100% | 1 |
| 3HDY_GDU_B_500 | 70% | 2% | 0.083 | 0.942 | 2.64 | 3.61 | 4 | 20 | 4 | 0 | 100% | 1 |
| 3HDY_GDU_D_500 | 69% | 2% | 0.086 | 0.943 | 2.66 | 3.63 | 4 | 17 | 6 | 0 | 100% | 1 |
| 3HDY_GDU_F_500 | 62% | 2% | 0.101 | 0.934 | 2.66 | 3.58 | 4 | 17 | 3 | 0 | 100% | 1 |
| 3HDY_GDU_A_500 | 61% | 2% | 0.102 | 0.932 | 2.7 | 3.6 | 4 | 21 | 5 | 0 | 100% | 1 |
| 3HDY_GDU_J_500 | 59% | 2% | 0.105 | 0.926 | 2.67 | 3.56 | 4 | 16 | 0 | 0 | 100% | 1 |
| 3HDY_GDU_E_500 | 57% | 2% | 0.113 | 0.931 | 2.66 | 3.6 | 4 | 19 | 3 | 0 | 100% | 1 |
| 3HDY_GDU_I_500 | 55% | 2% | 0.112 | 0.918 | 2.67 | 3.57 | 4 | 17 | 1 | 0 | 100% | 1 |
| 3HDY_GDU_H_500 | 55% | 3% | 0.112 | 0.917 | 2.67 | 3.54 | 4 | 18 | 2 | 0 | 100% | 1 |
| 3HDY_GDU_C_500 | 49% | 2% | 0.117 | 0.896 | 2.66 | 3.65 | 4 | 19 | 6 | 0 | 100% | 1 |
| 3HDQ_GDU_A_500 | 89% | 3% | 0.059 | 0.982 | 2.66 | 3.55 | 5 | 16 | 0 | 0 | 100% | 0.84 |
| 3UKP_GDU_D_602 | 99% | 14% | 0.031 | 0.993 | 2.02 | 1.84 | 10 | 13 | 5 | 0 | 100% | 1 |
| 6GX0_GDU_A_402 | 97% | 37% | 0.038 | 0.987 | 1.15 | 1.25 | 3 | 9 | 0 | 0 | 100% | 0.5 |
| 3UKF_GDU_H_802 | 97% | 14% | 0.042 | 0.993 | 1.94 | 1.89 | 12 | 10 | 3 | 0 | 100% | 1 |
| 5M7D_GDU_A_402 | 95% | 41% | 0.044 | 0.984 | 1.11 | 1.11 | 3 | 5 | 0 | 0 | 100% | 1 |
| 4HO9_GDU_B_300 | 94% | 21% | 0.045 | 0.98 | 1.45 | 1.83 | 5 | 11 | 0 | 0 | 100% | 1 |














