GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 2GJ8 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 2GJ8_GDP_C_652 | 99% | 34% | 0.041 | 0.984 | 1.13 | 1.36 | 1 | 3 | 0 | 0 | 100% | 1 |
| 2GJ8_GDP_A_650 | 98% | 41% | 0.05 | 0.978 | 1.05 | 1.15 | 1 | 2 | 0 | 0 | 100% | 1 |
| 2GJ8_GDP_D_653 | 96% | 37% | 0.057 | 0.976 | 0.96 | 1.42 | - | 3 | 1 | 0 | 100% | 1 |
| 2GJ8_GDP_B_651 | 84% | 32% | 0.087 | 0.953 | 1.24 | 1.37 | 2 | 4 | 0 | 0 | 100% | 1 |
| 2GJA_GDP_A_400 | 96% | 45% | 0.065 | 0.985 | 0.88 | 1.12 | 1 | 4 | 0 | 0 | 100% | 1 |
| 2GJ9_GDP_A_400 | 90% | 37% | 0.087 | 0.979 | 1.13 | 1.25 | 2 | 3 | 0 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 22% | 0.012 | 0.999 | 2.28 | 0.95 | 3 | 2 | 8 | 0 | 100% | 1 |
| 9C3K_GDP_B_201 | 100% | 38% | 0.014 | 0.998 | 1.15 | 1.18 | 1 | 3 | 0 | 0 | 100% | 1 |
| 8ECR_GDP_A_302 | 100% | 28% | 0.017 | 0.998 | 1.48 | 1.32 | 2 | 4 | 0 | 0 | 100% | 1 |
| 9BL0_GDP_A_201 | 100% | 44% | 0.016 | 0.998 | 0.96 | 1.11 | 1 | 2 | 1 | 0 | 100% | 1 |
| 9C3N_GDP_A_202 | 100% | 36% | 0.017 | 0.998 | 1.36 | 1.06 | 3 | 1 | 0 | 0 | 100% | 1 |
