Ligand validation:2DYR

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Model completeness	Average occupancy
2DYR_PGV_C_267	66%	52%	0.105	0.959	0.84	0.85	1	2	9	100%	1
2DYR_PGV_P_1267	65%	52%	0.106	0.957	0.85	0.83	1	1	7	100%	1
2DYR_PGV_A_525	65%	53%	0.108	0.959	0.9	0.75	2	2	1	100%	1
2DYR_PGV_N_1266	64%	52%	0.109	0.956	0.93	0.78	2	3	3	100%	1
2DYR_PGV_Z_1524	5%	47%	0.23	0.768	1.05	0.92	3	2	5	100%	1
2DYR_PGV_A_524	3%	45%	0.26	0.759	1.08	0.95	3	2	7	100%	1
2DYR_PGV_C_268	2%	45%	0.277	0.751	1.25	0.82	3	1	1	100%	1
2DYR_PGV_P_1268	2%	43%	0.273	0.714	1.28	0.84	4	1	3	100%	1
5X1B_PGV_C_302	93%	49%	0.047	0.982	0.92	0.94	2	5	0	100%	1
6NKN_PGV_A_607	93%	41%	0.046	0.98	0.85	1.36	2	5	0	100%	1
3ASN_PGV_A_522	87%	45%	0.061	0.977	0.86	1.18	2	2	1	100%	1
6NMF_PGV_A_606	87%	49%	0.061	0.975	0.93	0.92	2	3	0	100%	1
9IKG_PGV_A_614	83%	50%	0.073	0.982	0.75	1.07	2	2	0	100%	1
5X1F_PGV_A_608	82%	39%	0.074	0.977	0.89	1.43	3	7	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

2DYR | pdb_00002dyr