Ligand validation:2DYR

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
2DYR_CHD_O_229	92%	32%	0.047	0.974	0.85	1.83	-	13	2	0	100%	1
2DYR_CHD_B_1086	87%	34%	0.056	0.969	0.75	1.8	-	14	0	0	100%	1
2DYR_CHD_P_1525	83%	36%	0.062	0.961	0.88	1.59	-	9	0	0	100%	1
2DYR_CHD_C_525	82%	35%	0.062	0.959	0.87	1.65	1	12	0	0	100%	1
2DYR_CHD_P_1271	7%	9%	0.222	0.781	0.82	3.54	-	22	3	5	100%	1
2DYR_CHD_C_271	5%	9%	0.225	0.764	0.84	3.6	-	22	3	5	100%	1
2DYR_CHD_J_60	2%	11%	0.276	0.725	0.91	3.19	1	25	2	5	100%	1
2DYR_CHD_W_1060	1%	11%	0.278	0.694	0.98	3.17	2	26	3	5	100%	1
3AG2_CHD_B_304	94%	32%	0.045	0.981	1.05	1.64	2	13	0	0	100%	1
3ASN_CHD_G_229	94%	47%	0.045	0.981	0.68	1.26	1	3	0	0	100%	1
6NKN_CHD_G_104	93%	58%	0.042	0.972	0.59	0.85	-	-	0	0	100%	1
5ZCQ_CHD_G_103	92%	9%	0.048	0.978	2.08	2.39	13	20	2	0	100%	1
7VVR_CHD_O_301	92%	38%	0.049	0.979	1.09	1.26	1	4	2	0	100%	1
8VEJ_CHD_B_301	99%	32%	0.027	0.995	0.88	1.78	1	11	2	0	100%	1
7D1X_CHD_A_501	99%	89%	0.028	0.994	0.16	0.43	-	-	0	0	100%	1
2FT9_CHD_A_131	99%	39%	0.031	0.994	0.95	1.34	-	5	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

2DYR | pdb_00002dyr