GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 2DGN designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2DGN_GDP_A_1452 | 91% | 61% | 0.05 | 0.981 | 0.79 | 0.55 | 1 | - | 0 | 0 | 100% | 1 |
| 1LNY_GDP_B_1454 | 92% | 61% | 0.045 | 0.976 | 0.84 | 0.48 | 1 | - | 3 | 0 | 100% | 1 |
| 1MF0_GDP_A_1452 | 88% | 60% | 0.055 | 0.975 | 0.8 | 0.57 | 1 | - | 1 | 0 | 100% | 1 |
| 1MEZ_GDP_A_1452 | 78% | 61% | 0.07 | 0.961 | 0.77 | 0.55 | 1 | - | 0 | 0 | 100% | 1 |
| 1LON_GDP_A_1453 | 77% | 59% | 0.067 | 0.952 | 0.82 | 0.57 | 1 | - | 1 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 34% | 0.012 | 0.999 | 1.95 | 0.71 | 1 | 1 | 8 | 0 | 100% | 1 |
| 6EG8_GDP_L_401 | 100% | 28% | 0.013 | 0.999 | 1.16 | 1.75 | 3 | 7 | 3 | 0 | 100% | 1 |
| 2CNW_GDP_F_1001 | 100% | 25% | 0.014 | 0.999 | 1.21 | 1.86 | 4 | 8 | 0 | 0 | 100% | 1 |
| 5V9L_GDP_B_201 | 100% | 35% | 0.013 | 0.998 | 0.98 | 1.53 | 1 | 7 | 0 | 0 | 100% | 1 |
| 3ZY3_GDP_A_1384 | 100% | 28% | 0.014 | 0.998 | 1.13 | 1.74 | 3 | 8 | 1 | 0 | 100% | 1 |
