URI: URIDINE
URI is a Ligand Of Interest in 1LOJ designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
1LOJ_URI_M_9004 | 42% | 33% | 0.215 | 0.935 | 1.44 | 1.23 | 2 | 3 | 4 | 0 | 100% | 0.7812 |
1LOJ_URI_E_9006 | 25% | 22% | 0.231 | 0.867 | 1.95 | 1.34 | 4 | 5 | 0 | 0 | 100% | 0.9929 |
1LOJ_URI_L_9005 | 23% | 31% | 0.267 | 0.894 | 1.61 | 1.15 | 2 | 2 | 2 | 0 | 100% | 0.9071 |
1LOJ_URI_C_9011 | 20% | 23% | 0.257 | 0.861 | 1.83 | 1.35 | 3 | 2 | 1 | 0 | 100% | 0.8553 |
1LOJ_URI_J_9001 | 9% | 36% | 0.271 | 0.756 | 1.5 | 1.04 | 2 | 1 | 1 | 0 | 100% | 0.8865 |
1LOJ_URI_G_9012 | 8% | 31% | 0.36 | 0.842 | 1.63 | 1.12 | 3 | 1 | 4 | 0 | 100% | 0.9488 |
1LOJ_URI_F_9009 | 2% | 29% | 0.499 | 0.775 | 1.73 | 1.15 | 3 | 2 | 3 | 0 | 100% | 0.9112 |
1LOJ_URI_B_9007 | 1% | 29% | 0.566 | 0.663 | 1.7 | 1.17 | 4 | 1 | 0 | 0 | 100% | 0.9965 |
5M2T_URI_E_301 | 100% | 37% | 0.043 | 0.991 | 0.83 | 1.6 | - | 5 | 1 | 0 | 100% | 0.94 |
4R07_URI_B_901 | 97% | 19% | 0.068 | 0.982 | 1.42 | 2 | 5 | 7 | 1 | 0 | 100% | 1 |
3IVD_URI_B_603 | 95% | 63% | 0.071 | 0.976 | 0.53 | 0.86 | - | - | 0 | 0 | 100% | 1 |
5ILW_URI_A_802 | 91% | 33% | 0.081 | 0.967 | 1.19 | 1.44 | 3 | 4 | 0 | 0 | 100% | 1 |
4R08_URI_D_901 | 90% | 21% | 0.101 | 0.984 | 1.39 | 1.94 | 3 | 7 | 0 | 0 | 100% | 1 |