UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 1GY8 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 1GY8_UDP_A_1383 | 86% | 25% | 0.096 | 0.965 | 1.52 | 1.52 | 4 | 6 | 0 | 0 | 100% | 1 |
| 1GY8_UDP_D_1383 | 85% | 25% | 0.106 | 0.973 | 1.52 | 1.53 | 3 | 6 | 0 | 0 | 100% | 1 |
| 1GY8_UDP_B_1383 | 85% | 26% | 0.11 | 0.977 | 1.5 | 1.51 | 4 | 6 | 0 | 0 | 100% | 1 |
| 1GY8_UDP_C_1383 | 68% | 27% | 0.13 | 0.942 | 1.45 | 1.5 | 4 | 6 | 0 | 0 | 100% | 1 |
| 8VH8_UDP_C_704 | 100% | 62% | 0.032 | 0.995 | 0.55 | 0.9 | - | 1 | 0 | 0 | 100% | 1 |
| 4PHR_UDP_A_301 | 100% | 42% | 0.042 | 0.989 | 0.84 | 1.41 | - | 4 | 0 | 0 | 100% | 1 |
| 2B69_UDP_A_900 | 100% | 42% | 0.046 | 0.992 | 1.03 | 1.21 | 2 | 4 | 0 | 0 | 100% | 1 |
| 1GX4_UDP_B_401 | 100% | 27% | 0.047 | 0.992 | 1.85 | 1.09 | 3 | 4 | 0 | 0 | 100% | 1 |
| 3U2V_UDP_B_270 | 99% | 33% | 0.049 | 0.989 | 1.12 | 1.52 | 2 | 6 | 0 | 0 | 100% | 1 |
