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Solution structure of Site2 dimer of Ler


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D 1H-13C NOESY1.0 mM 15N_13C Ler 18-74_CN95% H2O/5% D2O139(50mM NaH2PO4, 50 mM NaCl, pH7) mM71 atm298Bruker AVANCE III HD 950
23D 1H-15N NOESY1.0 mM 15N_13C Ler 18-74_CN95% H2O/5% D2O139(50mM NaH2PO4, 50 mM NaCl, pH7) mM71 atm298Bruker AVANCE III HD 950
223D 1H-13C NOESY aromatic1.0 mM 15N_13C Ler 18-74_CN95% H2O/5% D2O139(50mM NaH2PO4, 50 mM NaCl, pH7) mM71 atm298Bruker AVANCE III HD 950
143D F1-15N/13C FILTERED, F2-13C EDITED NOESY2.0 mM half 15N_13C Ler 18-74_chimera95% H2O/5% D2O139(50mM NaH2PO4, 50 mM NaCl, pH7) mM71 atm298Bruker AVANCE III HD 950
153D F1-15N/13C FILTERED, F2-15N EDITED NOESY2.0 mM half 15N_13C Ler 18-74_chimera95% H2O/5% D2O139(50mM NaH2PO4, 50 mM NaCl, pH7) mM71 atm298Bruker AVANCE III HD 950
33D CBCA(CO)NH1.0 mM 15N_13C Ler 18-74_CN95% H2O/5% D2O139(50mM NaH2PO4, 50 mM NaCl, pH7) mM71 atm298Bruker AVANCE III HD 500
43D HNCACB1.0 mM 15N_13C Ler 18-74_CN95% H2O/5% D2O139(50mM NaH2PO4, 50 mM NaCl, pH7) mM71 atm298Bruker AVANCE III HD 500
53D HBHA(CO)NH1.0 mM 15N_13C Ler 18-74_CN95% H2O/5% D2O139(50mM NaH2PO4, 50 mM NaCl, pH7) mM71 atm298Bruker AVANCE III HD 500
73D HCCH-COSY1.0 mM 15N_13C Ler 18-74_CN95% H2O/5% D2O139(50mM NaH2PO4, 50 mM NaCl, pH7) mM71 atm298Bruker AVANCE III HD 500
183D HNCA1.0 mM 15N_13C Ler 18-74_CN95% H2O/5% D2O139(50mM NaH2PO4, 50 mM NaCl, pH7) mM71 atm298Bruker AVANCE III HD 500
203D CCH-COSY1.0 mM 15N_13C Ler 18-74_CN95% H2O/5% D2O139(50mM NaH2PO4, 50 mM NaCl, pH7) mM71 atm298Bruker AVANCE III HD 500
193D CCH-TOCSY1.0 mM 15N_13C Ler 18-74_CN95% H2O/5% D2O139(50mM NaH2PO4, 50 mM NaCl, pH7) mM71 atm298Bruker AVANCE III HD 500
62D 1H-15N HSQC1.0 mM 15N_13C Ler 18-74_CN95% H2O/5% D2O139(50mM NaH2PO4, 50 mM NaCl, pH7) mM71 atm298Bruker AVANCE III HD 950
172D 1H-13C HSQC1.0 mM 15N_13C Ler 18-74_CN95% H2O/5% D2O139(50mM NaH2PO4, 50 mM NaCl, pH7) mM71 atm298Bruker AVANCE III HD 950
162D 1H-13C HSQC aromatic1.0 mM 15N_13C Ler 18-74_CN95% H2O/5% D2O139(50mM NaH2PO4, 50 mM NaCl, pH7) mM71 atm298Bruker AVANCE III HD 950
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III HD950
2BrukerAVANCE III HD500
NMR Refinement
MethodDetailsSoftware
simulated annealingCYANA
simulated annealingAmber
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementAmberCase, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman
2structure calculationCYANAGuntert, Mumenthaler and Wuthrich
3chemical shift assignmentNMRViewJohnson, One Moon Scientific
4peak pickingNMRViewJohnson, One Moon Scientific
5collectionTopSpinBruker Biospin
6processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
7data analysisSANEDuggan, Legge, Dyson & Wright