9EU6

The FK1 domain of FKBP51 in complex with SAFit-analog 23j


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP29345% Pentaerythritol propoxylate 5/4 PO/OH, 15% ethanol
Crystal Properties
Matthews coefficientSolvent content
2.2545.32

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 48.176α = 90
b = 48.176β = 90
c = 94.031γ = 120
Symmetry
Space GroupP 31

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100PIXELDECTRIS PILATUS3 S 6M2022-09-10MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONBESSY BEAMLINE 14.10.918400BESSY14.1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Rrim I (All)Rpim I (All)CC (Half)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.5447.0299.90.0490.060.0350.99914.65.636113
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Rrim I (All)Rpim I (All)CC (Half)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.541.571.3421.7111.0470.2394.5

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT1.5441.75636075179499.8530.1950.19310.222424.975
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.1130.0570.113-0.368
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_6_deg14.481
r_dihedral_angle_3_deg11.764
r_dihedral_angle_2_deg9.192
r_dihedral_angle_1_deg7.399
r_lrange_it4.803
r_lrange_other4.773
r_scangle_it3.302
r_scangle_other3.301
r_mcangle_it2.417
r_mcangle_other2.417
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_6_deg14.481
r_dihedral_angle_3_deg11.764
r_dihedral_angle_2_deg9.192
r_dihedral_angle_1_deg7.399
r_lrange_it4.803
r_lrange_other4.773
r_scangle_it3.302
r_scangle_other3.301
r_mcangle_it2.417
r_mcangle_other2.417
r_scbond_it2.307
r_scbond_other2.306
r_angle_refined_deg1.717
r_mcbond_it1.668
r_mcbond_other1.666
r_chiral_restr_other1.339
r_angle_other_deg0.94
r_nbd_refined0.196
r_symmetry_nbd_other0.189
r_nbtor_refined0.174
r_nbd_other0.162
r_xyhbond_nbd_refined0.125
r_symmetry_xyhbond_nbd_refined0.12
r_symmetry_nbd_refined0.085
r_symmetry_nbtor_other0.083
r_chiral_restr0.081
r_bond_refined_d0.011
r_gen_planes_refined0.008
r_bond_other_d0.003
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1834
Nucleic Acid Atoms
Solvent Atoms111
Heterogen Atoms38

Software

Software
Software NamePurpose
REFMACrefinement
autoXDSdata reduction
Aimlessdata scaling
PHASERphasing