8URV

Solution NMR structure of pro-IL-18


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D HCH NOESY0.5 mM [U-13C; U-15N] pro-interleukin-18, 20 mM MES, 50 mM potassium chloride, 10 mM DTT100% D2O50 mM6.11 atm298.1Bruker AVANCE NEO 1000
23D HNH NOESY0.5 mM [U-13C; U-15N] pro-interleukin-18, 20 mM MES, 50 mM potassium chloride, 10 mM DTT97% H2O/3% D2O50 mM6.51 atm298.1Bruker AVANCE NEO 1000
33D NNH NOESY0.5 mM [U-13C; U-15N] pro-interleukin-18, 20 mM MES, 50 mM potassium chloride, 10 mM DTT97% H2O/3% D2O50 mM6.51 atm298.1Bruker AVANCE NEO 1000
42D NH HSQC0.5 mM [U-13C; U-15N] pro-interleukin-18, 20 mM MES, 50 mM potassium chloride, 10 mM DTT97% H2O/3% D2O50 mM6.51 atm298.1Bruker AVANCE III HD 800
52D CH HSQC0.5 mM [U-13C; U-15N] pro-interleukin-18, 20 mM MES, 50 mM potassium chloride, 10 mM DTT100% D2O50 mM6.11 atm298.1Bruker AVANCE NEO 1000
63D HNCO0.5 mM [U-13C; U-15N] pro-interleukin-18, 20 mM MES, 50 mM potassium chloride, 10 mM DTT97% H2O/3% D2O50 mM6.51 atm298.1Bruker AVANCE III HD 800
73D HN(CA)CO0.5 mM [U-13C; U-15N] pro-interleukin-18, 20 mM MES, 50 mM potassium chloride, 10 mM DTT97% H2O/3% D2O50 mM6.51 atm298.1Bruker AVANCE III HD 800
83D CBCA(CO)NH0.5 mM [U-13C; U-15N] pro-interleukin-18, 20 mM MES, 50 mM potassium chloride, 10 mM DTT97% H2O/3% D2O50 mM6.51 atm298.1Bruker AVANCE III HD 800
93D HNCACB0.5 mM [U-13C; U-15N] pro-interleukin-18, 20 mM MES, 50 mM potassium chloride, 10 mM DTT97% H2O/3% D2O50 mM6.51 atm298.1Bruker AVANCE III HD 800
103D HNN0.5 mM [U-13C; U-15N] pro-interleukin-18, 20 mM MES, 50 mM potassium chloride, 10 mM DTT97% H2O/3% D2O50 mM6.51 atm298.1Bruker AVANCE III HD 800
123D HBHA(CO)NH0.5 mM [U-13C; U-15N] pro-interleukin-18, 20 mM MES, 50 mM potassium chloride, 10 mM DTT97% H2O/3% D2O50 mM6.51 atm298.1Bruker AVANCE III HD 800
113D C(CO)NH TOCSY0.5 mM [U-13C; U-15N] pro-interleukin-18, 20 mM MES, 50 mM potassium chloride, 10 mM DTT97% H2O/3% D2O50 mM6.51 atm298.1Bruker AVANCE III HD 600
133D H(CCO)NH TOCSY0.5 mM [U-13C; U-15N] pro-interleukin-18, 20 mM MES, 50 mM potassium chloride, 10 mM DTT97% H2O/3% D2O50 mM6.51 atm298.1Bruker AVANCE III HD 600
143D C(CA)NH TOCSY0.5 mM [U-13C; U-15N] pro-interleukin-18, 20 mM MES, 50 mM potassium chloride, 10 mM DTT97% H2O/3% D2O50 mM6.51 atm298.1Bruker AVANCE III HD 600
152D CB(CGCD)HD0.5 mM [U-13C; U-15N] pro-interleukin-18, 20 mM MES, 50 mM potassium chloride, 10 mM DTT100% D2O50 mM6.11 atm298.1Bruker AVANCE NEO 1000
162D CB(CGCDCE)HE0.5 mM [U-13C; U-15N] pro-interleukin-18, 20 mM MES, 50 mM potassium chloride, 10 mM DTT100% D2O50 mM6.11 atm298.1Bruker AVANCE NEO 1000
172D CBCG(CE)HE0.5 mM [U-13C; U-15N] pro-interleukin-18, 20 mM MES, 50 mM potassium chloride, 10 mM DTT100% D2O50 mM6.11 atm298.1Bruker AVANCE III HD 800
182D CH CT-HSQC0.5 mM [5% U-13C; U-15N] pro-interleukin-18, 20 mM MES, 50 mM potassium chloride, 10 mM DTT97% H2O/3% D2O50 mM6.51 atm298.1Bruker AVANCE NEO 1000
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III HD800
2BrukerAVANCE III HD600
3BrukerAVANCE NEO1000
NMR Refinement
MethodDetailsSoftware
simulated annealingFastRelax with constraintsRosetta
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number10
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1chemical shift assignmentI-PINELee, Bahrami, Dashti, Eghbalnia, Tonelli, Westler and Markley
2structure calculationCYANA3.98.15Herrmann, Guntert and Wuthrich
3refinementRosetta3Leaver-Fay et al.
4peak pickingNMRFAM-SPARKYLee, Tonelli and Markley