7Z9Z

Mutant L39Y of recombinant bovine beta-lactoglobulin in complex with pramocaine

X-RAY DIFFRACTION

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Crystallization

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	VAPOR DIFFUSION, HANGING DROP	8.5	293	2.4 M ammonium sulfate in 0.5 M Tris-HCl, pH 8.5

Crystal Properties
Matthews coefficient	Solvent content
2.48	50.38

Crystal Data

Unit Cell
Length ( Å )	Angle ( ˚ )
a = 53.321	α = 90
b = 53.321	β = 90
c = 110.703	γ = 120

Symmetry
Space Group	P 32 2 1

Diffraction

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	100	CCD	AGILENT ATLAS CCD		2018-10-19	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SEALED TUBE	Agilent SuperNova	1.54056

Data Collection

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	R Merge I (Observed)	Rrim I (All)	CC (Half)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	2.5	14.76	98.9	0.111	0.124	0.995	8.1	4.7		6648

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	R Merge I (Observed)	Rrim I (All)	CC (Half)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
1	2.5	2.61			0.64	0.751	0.723	1.7

Refinement

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Starting model	Resolution (High)	Resolution (Low)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (All)	R-Work	R-Free	Mean Isotropic B
X-RAY DIFFRACTION	MOLECULAR REPLACEMENT	FREE R-VALUE	1BSY	2.5	14.76	6620	1013	98.541	0.215	0.2045	0.2758	38.846

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
0.544	0.272		0.544		-1.763

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	38.848
r_dihedral_angle_3_deg	16.86
r_lrange_it	8.12
r_lrange_other	8.098
r_dihedral_angle_1_deg	7.179
r_dihedral_angle_4_deg	6.541
r_scangle_it	5.403
r_scangle_other	5.356
r_mcangle_it	4.213
r_mcangle_other	4.211
r_scbond_it	3.273
r_scbond_other	3.214
r_mcbond_it	2.648
r_mcbond_other	2.638
r_angle_refined_deg	1.41
r_angle_other_deg	1.13
r_nbd_other	0.262
r_symmetry_xyhbond_nbd_refined	0.214
r_symmetry_nbd_other	0.19
r_xyhbond_nbd_refined	0.182
r_nbd_refined	0.18
r_nbtor_refined	0.156
r_symmetry_nbd_refined	0.127
r_symmetry_nbtor_other	0.079
r_chiral_restr	0.055
r_bond_refined_d	0.007
r_gen_planes_refined	0.006
r_bond_other_d	0.001
r_gen_planes_other	0.001

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	1175
Nucleic Acid Atoms
Solvent Atoms	59
Heterogen Atoms	27

Software

Software
Software Name	Purpose
REFMAC	refinement
CrysalisPro	data reduction
Aimless	data scaling
PHASER	phasing