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Synechocystis sp. PCC6803 glutathione transferase Chi 1, GSOH bound
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 3LSZ
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 EVAPORATION 277 Protein solution: 44 mg/mL protein, 12 mM GSH, 30mM Tris pH 8, 200 mM NaCl; Reservoir solution: 16% (w/v) PEG 8000, 40 mM Potassium phosphate monobasic 2, 20% (v/v) Glycerol
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 92.613 α = 90 b = 92.613 β = 90 c = 193.561 γ = 90
Symmetry Space Group P 43 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS EIGER X 9M 2020-07-17 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SOLEIL BEAMLINE PROXIMA 2 0.980111 SOLEIL PROXIMA 2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.16 48.39 99.7 0.115 0.023 0.999 21.6 26.6 45994
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.16 2.23 97.4 1.749 0.343 0.95 2.5 25.3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 3LSZ 2.16 31.47 45898 2275 99.7 0.2167 0.2159 0.2072 0.2316 0.2238 RANDOM 52.98
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -12.1517 -12.1517 24.3035
RMS Deviations Key Refinement Restraint Deviation t_other_torsion 15.31 t_omega_torsion 3.07 t_angle_deg 0.95 t_bond_d 0.008 t_dihedral_angle_d t_gen_planes t_it t_chiral_improper_torsion t_ideal_dist_contact
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2862 Nucleic Acid Atoms Solvent Atoms 304 Heterogen Atoms 43
Software Software Software Name Purpose BUSTER refinement XDS data reduction Aimless data scaling MoRDa phasing