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Unspecific peroxygenase from Hypoxylon sp. EC38 in complex with styrene
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 293 20% PEG500 MME, 10% PEG20000, 0.1 M MES monohydrate pH 6.5
Crystal Properties Matthews coefficient Solvent content 3.51 64.95
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 71.9 α = 90 b = 71.9 β = 90 c = 154.555 γ = 90
Symmetry Space Group P 41 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS EIGER X 16M 2020-09-27 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X06SA 0.9772 SLS X06SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.1 154.55 97.1 0.221 0.23 0.064 0.998 8 12.7 23855
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.1 2.16 99.8 5.707 5.931 1.606 0.379 13.5
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION FOURIER SYNTHESIS THROUGHOUT 2.1 65.19 23068 716 97.11 0.203 0.2024 0.2093 0.2226 0.2244 RANDOM 50.941
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 2.06 2.06 -4.12
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.712 r_dihedral_angle_4_deg 20.245 r_dihedral_angle_3_deg 15.915 r_dihedral_angle_1_deg 6.329 r_angle_refined_deg 1.717 r_angle_other_deg 1.353 r_chiral_restr 0.073 r_bond_refined_d 0.01 r_gen_planes_refined 0.008 r_gen_planes_other 0.005
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.712 r_dihedral_angle_4_deg 20.245 r_dihedral_angle_3_deg 15.915 r_dihedral_angle_1_deg 6.329 r_angle_refined_deg 1.717 r_angle_other_deg 1.353 r_chiral_restr 0.073 r_bond_refined_d 0.01 r_gen_planes_refined 0.008 r_gen_planes_other 0.005 r_bond_other_d 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1757 Nucleic Acid Atoms Solvent Atoms 30 Heterogen Atoms 84
Software Software Software Name Purpose REFMAC refinement Aimless data scaling PDB_EXTRACT data extraction XDS data reduction PHASER phasing