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The structure of the SBP TarP_Sse in complex with coumarate
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.25 290 0.2 M NaCl, 0.1 M sodium cacodylate pH 6.25 and 1.8 M ammonium sulphate
Crystal Properties Matthews coefficient Solvent content 2.46 49.99
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 82.84 α = 90 b = 88.08 β = 92.28 c = 96.58 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M 2014-07-10 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON DIAMOND BEAMLINE I02 0.97918, 0.97938 Diamond I02
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rpim I (All) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.13 50.5 99.7 0.056 0.062 12.5 3.4 77509
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rpim I (All) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.13 2.19 99.8 0.432 0.343 2.3 3.3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MAD FREE R-VALUE 2.13 50.496 77490 3698 99.698 0.182 0.1796 0.1876 0.2363 0.2388 35.713
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.468 -0.059 0.895 0.577
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.297 r_dihedral_angle_4_deg 15.973 r_dihedral_angle_3_deg 15.478 r_dihedral_angle_1_deg 7.339 r_lrange_it 7.215 r_lrange_other 7.215 r_scangle_it 6.015 r_scangle_other 5.996 r_mcangle_it 4.515 r_mcangle_other 4.514
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.297 r_dihedral_angle_4_deg 15.973 r_dihedral_angle_3_deg 15.478 r_dihedral_angle_1_deg 7.339 r_lrange_it 7.215 r_lrange_other 7.215 r_scangle_it 6.015 r_scangle_other 5.996 r_mcangle_it 4.515 r_mcangle_other 4.514 r_scbond_it 4.116 r_scbond_other 4.104 r_mcbond_it 3.268 r_mcbond_other 3.268 r_angle_refined_deg 1.788 r_angle_other_deg 1.301 r_nbd_refined 0.213 r_nbd_other 0.193 r_symmetry_nbd_other 0.176 r_nbtor_refined 0.17 r_xyhbond_nbd_refined 0.165 r_symmetry_nbd_refined 0.132 r_symmetry_xyhbond_nbd_refined 0.119 r_chiral_restr 0.082 r_symmetry_nbtor_other 0.08 r_symmetry_xyhbond_nbd_other 0.017 r_bond_refined_d 0.01 r_gen_planes_refined 0.009 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 9904 Nucleic Acid Atoms Solvent Atoms 425 Heterogen Atoms 95
Software Software Software Name Purpose REFMAC refinement XDS data reduction XSCALE data scaling SHELXCD phasing SHELXE model building