6TG4

Tankyrase 2 in complex with an inhibitor (OM-1700)

X-RAY DIFFRACTION

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Starting Model(s)

Initial Refinement Model(s)
Type	Source	Accession Code	Details
experimental model	PDB	5NOB

Crystallization

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	VAPOR DIFFUSION, SITTING DROP		295.15	7.5-25% PEG 6000, Bicine, pH = 9.0

Crystal Properties
Matthews coefficient	Solvent content
2.28	45.96

Crystal Data

Unit Cell
Length ( Å )	Angle ( ˚ )
a = 42.68	α = 90
b = 77.9	β = 90
c = 149.52	γ = 90

Symmetry
Space Group	P 21 21 21

Diffraction

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	100	PIXEL	DECTRIS PILATUS3 6M		2018-04-09	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	ESRF BEAMLINE ID30B	0.96770	ESRF	ID30B

Data Collection

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	CC (Half)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	2.76	50	99.5	0.979	5.33	6.16164		13394

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	CC (Half)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
1	2.76	2.83			0.498

Refinement

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Starting model	Resolution (High)	Resolution (Low)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (All)	R-Work	R-Free	Mean Isotropic B
X-RAY DIFFRACTION	MOLECULAR REPLACEMENT	FREE R-VALUE	5NOB	2.76	37.458	13394	670	99.495	0.232	0.2296	0.2809	44.877

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
0.391			2.608		-3

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	30.7
r_dihedral_angle_4_deg	20.997
r_dihedral_angle_3_deg	17.208
r_dihedral_angle_1_deg	7.264
r_lrange_it	6.565
r_lrange_other	6.564
r_scangle_it	4.153
r_scangle_other	4.152
r_mcangle_it	4.099
r_mcangle_other	4.099
r_scbond_it	2.527
r_scbond_other	2.527
r_mcbond_it	2.456
r_mcbond_other	2.456
r_chiral_restr_other	1.524
r_angle_refined_deg	1.388
r_angle_other_deg	1.207
r_nbd_other	0.219
r_nbd_refined	0.183
r_symmetry_nbd_other	0.179
r_nbtor_refined	0.163
r_symmetry_nbd_refined	0.136
r_xyhbond_nbd_refined	0.129
r_symmetry_xyhbond_nbd_refined	0.12
r_ncsr_local_group_1	0.105
r_symmetry_nbtor_other	0.075
r_chiral_restr	0.054
r_symmetry_xyhbond_nbd_other	0.052
r_bond_refined_d	0.005
r_gen_planes_refined	0.004
r_bond_other_d	0.002
r_gen_planes_other	0.001

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	3250
Nucleic Acid Atoms
Solvent Atoms	35
Heterogen Atoms	70

Software

Software
Software Name	Purpose
REFMAC	refinement
XDS	data reduction
XSCALE	data scaling
PHASER	phasing