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GSTF1 from Alopecurus myosuroides - covalently modified
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 5.6 298 Na/K tartrate and ammonium sulfate
Crystal Properties Matthews coefficient Solvent content 1.83 32.62
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 104.76 α = 90 b = 104.76 β = 90 c = 79.37 γ = 120
Symmetry Space Group P 63 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD APEX II CCD 2011-06-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE BRUKER AXS MICROSTAR 1.54
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.798 59.808 100 0.083 15.3 50.1 6748
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.798 2.86 100 0.47
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION FOURIER SYNTHESIS FREE R-VALUE 2.798 59.808 6674 316 99.035 0.211 0.2081 0.209 0.2808 0.2824 38.904
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.045 -0.023 -0.045 0.146
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.225 r_dihedral_angle_4_deg 19.41 r_dihedral_angle_3_deg 17.921 r_lrange_other 7.729 r_lrange_it 7.726 r_dihedral_angle_1_deg 6.716 r_scangle_it 5.348 r_scangle_other 5.346 r_mcangle_it 4.737 r_mcangle_other 4.735
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.225 r_dihedral_angle_4_deg 19.41 r_dihedral_angle_3_deg 17.921 r_lrange_other 7.729 r_lrange_it 7.726 r_dihedral_angle_1_deg 6.716 r_scangle_it 5.348 r_scangle_other 5.346 r_mcangle_it 4.737 r_mcangle_other 4.735 r_scbond_it 3.466 r_scbond_other 3.464 r_mcbond_it 3.154 r_mcbond_other 3.124 r_angle_other_deg 2.383 r_angle_refined_deg 1.721 r_symmetry_nbd_refined 0.376 r_symmetry_xyhbond_nbd_refined 0.231 r_symmetry_nbd_other 0.23 r_nbd_refined 0.226 r_nbd_other 0.22 r_nbtor_refined 0.181 r_xyhbond_nbd_refined 0.176 r_symmetry_nbtor_other 0.093 r_chiral_restr 0.071 r_bond_other_d 0.035 r_bond_refined_d 0.009 r_gen_planes_other 0.009 r_gen_planes_refined 0.007
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1470 Nucleic Acid Atoms Solvent Atoms 8 Heterogen Atoms 18
Software Software Software Name Purpose REFMAC refinement SAINT data reduction SADABS data scaling PHASER phasing