6TKC

ChiLob 7/4 H2 HC-C225S F(ab')2


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP7.5293PEG 4000, HEPES
Crystal Properties
Matthews coefficientSolvent content
3.1761.2

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 149.421α = 90
b = 149.421β = 90
c = 45.81γ = 120
Symmetry
Space GroupP 3 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray80PIXELDECTRIS PILATUS 12M2019-01-24MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONDIAMOND BEAMLINE I232.755DiamondI23

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Rpim I (All)CC (Half)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.3129.493.60.1510.0230.9981940.924537
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Rpim I (All)CC (Half)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.32.38850.1540.854.234.2

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTIONSADTHROUGHOUT2.374.82324536119393.3070.1860.18340.235944.852
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.279-0.14-0.2790.906
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.789
r_dihedral_angle_4_deg17.074
r_dihedral_angle_3_deg15.522
r_lrange_it9.189
r_lrange_other9.134
r_dihedral_angle_1_deg8.714
r_scangle_it6.847
r_scangle_other6.843
r_mcangle_it6.021
r_mcangle_other6.02
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.789
r_dihedral_angle_4_deg17.074
r_dihedral_angle_3_deg15.522
r_lrange_it9.189
r_lrange_other9.134
r_dihedral_angle_1_deg8.714
r_scangle_it6.847
r_scangle_other6.843
r_mcangle_it6.021
r_mcangle_other6.02
r_scbond_it4.6
r_scbond_other4.597
r_mcbond_it4.157
r_mcbond_other4.153
r_angle_other_deg2.47
r_angle_refined_deg1.645
r_symmetry_xyhbond_nbd_other0.243
r_symmetry_nbd_other0.219
r_nbd_refined0.203
r_xyhbond_nbd_refined0.198
r_nbd_other0.194
r_nbtor_refined0.165
r_symmetry_xyhbond_nbd_refined0.153
r_symmetry_nbd_refined0.098
r_symmetry_nbtor_other0.078
r_chiral_restr0.066
r_bond_other_d0.037
r_gen_planes_other0.011
r_bond_refined_d0.009
r_gen_planes_refined0.008
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms3243
Nucleic Acid Atoms
Solvent Atoms239
Heterogen Atoms

Software

Software
Software NamePurpose
REFMACrefinement
XDSdata reduction
Aimlessdata scaling
CRANK2phasing