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Human GSTO1-1 complexed with 2-chloro-N-(4-chloro-3-(N-(2-methoxyethyl)-N-methylsulfamoyl)phenyl)acetamide
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1EEM PDB entry 1EEM
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 277 1.7-2.2 M ammonium sulfate, 100 mM sodium citrate, 0.1 M sodium potassium tartrate, 0.75 mM zinc sulfate
Crystal Properties Matthews coefficient Solvent content 2.41 48.97
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 57.16 α = 90 b = 57.16 β = 90 c = 139.66 γ = 120
Symmetry Space Group P 31 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 210r 2018-11-08 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON AUSTRALIAN SYNCHROTRON BEAMLINE MX1 0.95370 Australian Synchrotron MX1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.1 47 100 0.101 0.031 0.997 16.6 10.3 16146 16.5
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.1 2.16 100 0.242 0.074 0.989 9.5 10.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB entry 1EEM 2.1 40.42 15321 780 99.94 0.17048 0.16837 0.1787 0.20959 0.2163 RANDOM 12.151
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.58 0.29 0.58 -1.87
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.38 r_dihedral_angle_4_deg 21.992 r_dihedral_angle_3_deg 16.776 r_long_range_B_refined 6.502 r_dihedral_angle_1_deg 6.44 r_long_range_B_other 6.323 r_scangle_other 2.62 r_angle_refined_deg 1.955 r_mcangle_it 1.846 r_mcangle_other 1.845
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.38 r_dihedral_angle_4_deg 21.992 r_dihedral_angle_3_deg 16.776 r_long_range_B_refined 6.502 r_dihedral_angle_1_deg 6.44 r_long_range_B_other 6.323 r_scangle_other 2.62 r_angle_refined_deg 1.955 r_mcangle_it 1.846 r_mcangle_other 1.845 r_scbond_it 1.641 r_scbond_other 1.64 r_angle_other_deg 1.469 r_mcbond_it 1.084 r_mcbond_other 1.084 r_chiral_restr 0.097 r_bond_refined_d 0.017 r_gen_planes_refined 0.012 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1911 Nucleic Acid Atoms Solvent Atoms 204 Heterogen Atoms 40
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction Aimless data scaling PHASER phasing