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Crystal structure of BhGH81 mutant in complex with laminaro-hexaose
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 5T49
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 5.5 291 15% PEG 10000, 0.2 M ammonium acetate, 0.1 M bis-tris
Crystal Properties Matthews coefficient Solvent content 2.91 57.73
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 65.48 α = 90 b = 96.5 β = 90 c = 156.87 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD RAYONIX MX-300 2014-09-09 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON CLSI BEAMLINE 08ID-1 0.97971 CLSI 08ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.8 82.19 100 0.127 0.995 11.3 7.3 92890
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.8 1.9 100 0.511 0.867 3.7 6.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 5T49 1.8 82.19 88168 4635 99.99 0.1426 0.1415 0.1544 0.1628 0.1741 RANDOM 14.807
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.47 0.86 -0.39
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.293 r_dihedral_angle_4_deg 14.711 r_dihedral_angle_3_deg 11.655 r_dihedral_angle_1_deg 6.784 r_angle_refined_deg 1.372 r_mcangle_it 1.205 r_angle_other_deg 0.942 r_mcbond_it 0.736 r_mcbond_other 0.724 r_chiral_restr 0.117
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.293 r_dihedral_angle_4_deg 14.711 r_dihedral_angle_3_deg 11.655 r_dihedral_angle_1_deg 6.784 r_angle_refined_deg 1.372 r_mcangle_it 1.205 r_angle_other_deg 0.942 r_mcbond_it 0.736 r_mcbond_other 0.724 r_chiral_restr 0.117 r_bond_refined_d 0.009 r_gen_planes_refined 0.006 r_bond_other_d 0.002 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 6025 Nucleic Acid Atoms Solvent Atoms 771 Heterogen Atoms 221
Software Software Software Name Purpose MOSFLM data reduction SCALA data scaling PHASER phasing REFMAC refinement PDB_EXTRACT data extraction