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Structure of S. cerevesiae mApe1 dodecamer
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 4R8F
Sample Mature Aminopeptidase-1 dodecamer
Specimen Preparation Sample Aggregation State PARTICLE Staining Type NEGATIVE Staining Material Uranyl acetate Staining Details
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 5481 Reported Resolution (Å) 24 Resolution Method FSC 0.5 CUT-OFF Other Details Refinement Type Symmetry Type POINT
Map-Model Fitting and Refinement Id 1 (4R8F) Refinement Space Refinement Protocol RIGID BODY FIT Refinement Target Cross-correlation coefficient Overall B Value Fitting Procedure Details
Data Acquisition Detector Type TVIPS TEMCAM-F415 (4k x 4k) Electron Dose (electrons/Å**2) 40
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model FEI/PHILIPS CM12 Minimum Defocus (nm) Maximum Defocus (nm) Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS Imaging Mode BRIGHT FIELD Specimen Holder Model SIDE ENTRY, EUCENTRIC Nominal Magnification 53000 Calibrated Magnification Source LAB6 Acceleration Voltage (kV) 120 Imaging Details
EM Software Task Software Package Version PARTICLE SELECTION EMAN 2.01 MODEL FITTING UCSF Chimera INITIAL EULER ASSIGNMENT EMAN 2.1 FINAL EULER ASSIGNMENT SPIDER RECONSTRUCTION SPIDER 19.09
Image Processing CTF Correction Type CTF Correction Details Number of Particles Selected Particle Selection Details NONE 5481