Find PDB structures and Computed Structure Models (CSM) by combining queries from tools in this suite: Attribute Search, Sequence Similarity, Sequence Motif, 3D Similarity, and 3D Motif with 'AND' logic.
VITRIFICATION 1 -- CRYOGEN- ETHANE, HUMIDITY- 95, INSTRUMENT- FEI VITROBOT MARK III, METHOD- BLOT FOR 2 SECONDS BEFORE PLUNGING
3D Reconstruction
Reconstruction Method
SINGLE PARTICLE
Number of Particles
Reported Resolution (Å)
2.8
Resolution Method
FSC 0.143 CUT-OFF
Other Details
SUBMISSION BASED ON EXPERIMENTAL DATA FROM EMDB EMD-3246. (DEPOSITION ID: 14064).
Refinement Type
Symmetry Type
Point Symmetry
I
Map-Model Fitting and Refinement
Id
1 (4V5T)
Refinement Space
REAL
Refinement Protocol
FLEXIBLE FIT
Refinement Target
Overall B Value
Fitting Procedure
Details
Initial atomic model building was done by a rigid body fitting, followed by extensive manual model building in Coot and real space refinement of the a ...
Initial atomic model building was done by a rigid body fitting, followed by extensive manual model building in Coot and real space refinement of the atomic model against the experimental map using Phenix including restrained temperature factor refinement.