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Human Tankyrase-2 in Complex with Macrocyclised Extended Peptide cp4n2m3
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 5 292 0.1 M tri-sodium citrate, pH 5.0, 3.2 M ammonium sulfate
Crystal Properties Matthews coefficient Solvent content 1.85 33.61
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 29.823 α = 78.45 b = 46.014 β = 88.99 c = 54.472 γ = 72.35
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M 2015-04-25 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON DIAMOND BEAMLINE I04-1 0.91731 Diamond I04-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.334 53.312 95.9 0.084 0.101 15.2 3.4 59052 59052 -3 13
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.334 1.338 91.2 0.525 2.3 1.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 1.334 53.31 56016 2934 95.75 0.17623 0.17484 0.1767 0.20273 0.205 RANDOM 16.322
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.38 -0.19 -0.09 0.84 0.49 -0.45
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 28.412 r_dihedral_angle_3_deg 14.524 r_dihedral_angle_4_deg 14.365 r_dihedral_angle_1_deg 5.402 r_long_range_B_refined 5.196 r_long_range_B_other 5.195 r_scangle_other 2.749 r_mcangle_it 1.976 r_mcangle_other 1.976 r_scbond_it 1.798
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 28.412 r_dihedral_angle_3_deg 14.524 r_dihedral_angle_4_deg 14.365 r_dihedral_angle_1_deg 5.402 r_long_range_B_refined 5.196 r_long_range_B_other 5.195 r_scangle_other 2.749 r_mcangle_it 1.976 r_mcangle_other 1.976 r_scbond_it 1.798 r_scbond_other 1.797 r_angle_refined_deg 1.577 r_mcbond_it 1.247 r_mcbond_other 1.246 r_angle_other_deg 1.23 r_chiral_restr 0.099 r_bond_refined_d 0.013 r_gen_planes_refined 0.008 r_bond_other_d 0.005 r_gen_planes_other 0.005 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2613 Nucleic Acid Atoms Solvent Atoms 277 Heterogen Atoms 42
Software Software Software Name Purpose REFMAC refinement Aimless data scaling PHASER phasing Coot model building XDS data reduction