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Assembly of methylated LSD1 and CHD1 drives AR-dependent transcription and translocation
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2B2W PDB ENTRY 2B2W
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 0.1 M HEPES PH 7.5, 0.2 M L-PROLINE, 10% (W/V) PEG3350
Crystal Properties Matthews coefficient Solvent content 2.77 56
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 110.296 α = 90 b = 44.445 β = 90 c = 46.194 γ = 90
Symmetry Space Group P 21 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M MIRRORS 2013-12-13 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON DIAMOND BEAMLINE I04 Diamond I04
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.6 55.15 98.8 0.03 16.4 4.4 30650 0.8 35.44
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.6 1.62 83.9 1.41 0.8 4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 2B2W 1.6 46.19 30488 1520 99.09 0.2103 0.2094 0.2139 0.2269 0.2335 RANDOM 56.96
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 8.9729 -12.2255 3.2526
RMS Deviations Key Refinement Restraint Deviation t_other_torsion 16.85 t_omega_torsion 3.62 t_angle_deg 0.98 t_bond_d 0.01 t_dihedral_angle_d t_incorr_chiral_ct t_pseud_angle t_trig_c_planes t_gen_planes t_it
RMS Deviations Key Refinement Restraint Deviation t_other_torsion 16.85 t_omega_torsion 3.62 t_angle_deg 0.98 t_bond_d 0.01 t_dihedral_angle_d t_incorr_chiral_ct t_pseud_angle t_trig_c_planes t_gen_planes t_it t_nbd t_improper_torsion t_chiral_improper_torsion t_sum_occupancies t_utility_distance t_utility_angle t_utility_torsion t_ideal_dist_contact
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1415 Nucleic Acid Atoms Solvent Atoms 119 Heterogen Atoms 39
Software Software Software Name Purpose BUSTER refinement XDS data reduction XDS data scaling PHASER phasing