☰ Navigation Tabs
Adenosine triphosphate phosphoribosyltransferase from Campylobacter jejuni in complex with ATP
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 5.5 293.15 Sodium Acetate, Magnesium Chloride, PEG4000, ATP
Crystal Properties Matthews coefficient Solvent content 2.72 54.86
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 91.667 α = 101.11 b = 91.835 β = 95.21 c = 154.903 γ = 118.14
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 80 CCD ADSC QUANTUM 210r 2014-04-02 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON AUSTRALIAN SYNCHROTRON BEAMLINE MX1 0.959 Australian Synchrotron MX1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.2 50 98.1 0.076 2 3.9 212958
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.2 2.24 97.3 0.8 1.6 4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.2 50 202326 10624 98.13 0.23248 0.23135 0.235 0.25429 0.2577 RANDOM 44.811
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.13 -0.72 0.25 0.01 0.47 1.05
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.42 r_dihedral_angle_4_deg 20.553 r_dihedral_angle_3_deg 15.52 r_long_range_B_refined 6.61 r_long_range_B_other 6.61 r_dihedral_angle_1_deg 5.322 r_scangle_other 4.684 r_mcangle_it 3.991 r_mcangle_other 3.991 r_scbond_it 2.996
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.42 r_dihedral_angle_4_deg 20.553 r_dihedral_angle_3_deg 15.52 r_long_range_B_refined 6.61 r_long_range_B_other 6.61 r_dihedral_angle_1_deg 5.322 r_scangle_other 4.684 r_mcangle_it 3.991 r_mcangle_other 3.991 r_scbond_it 2.996 r_scbond_other 2.996 r_mcbond_it 2.574 r_mcbond_other 2.574 r_angle_other_deg 1.523 r_angle_refined_deg 1.471 r_chiral_restr 0.073 r_bond_refined_d 0.009 r_bond_other_d 0.007 r_gen_planes_refined 0.006 r_gen_planes_other 0.004 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 26180 Nucleic Acid Atoms Solvent Atoms 365 Heterogen Atoms 418
Software Software Software Name Purpose REFMAC refinement XDS data reduction Aimless data scaling PHASER phasing