X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP5.62980.1 M cacodylate pH 5.6, 7.5% PEG6000, and 10 mM DTT
Crystal Properties
Matthews coefficientSolvent content
2.8156.16

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 61.533α = 90
b = 133.438β = 90
c = 170.249γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 2102012-06-20MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONCHESS BEAMLINE A10.979CHESSA1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.593699.90.0631.17.844061
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.62.6699.80.1810.97.8

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSADTHROUGHOUT2.593641741220898.820.190830.188730.23104RANDOM46.741
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.77-0.65-0.12
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg34.703
r_dihedral_angle_4_deg20.999
r_dihedral_angle_3_deg16.774
r_long_range_B_other8.282
r_long_range_B_refined8.275
r_scangle_other6.321
r_dihedral_angle_1_deg6.232
r_mcangle_other5.04
r_mcangle_it5.037
r_scbond_it3.89
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg34.703
r_dihedral_angle_4_deg20.999
r_dihedral_angle_3_deg16.774
r_long_range_B_other8.282
r_long_range_B_refined8.275
r_scangle_other6.321
r_dihedral_angle_1_deg6.232
r_mcangle_other5.04
r_mcangle_it5.037
r_scbond_it3.89
r_scbond_other3.89
r_mcbond_it3.181
r_mcbond_other3.172
r_angle_refined_deg1.637
r_angle_other_deg1.11
r_chiral_restr0.09
r_bond_refined_d0.016
r_gen_planes_refined0.008
r_bond_other_d0.005
r_gen_planes_other0.005
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms8244
Nucleic Acid Atoms
Solvent Atoms294
Heterogen Atoms4

Software

Software
Software NamePurpose
REFMACrefinement
HKL-2000data scaling
SHELXphasing