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1.5 Angstrom Crystal Structure of Putative Lipoprotein from Bacillus anthracis.
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 9 295 Protein: 7.5 mG/mL, 0.5 M Sodium chloride, 0.01 M Tris-HCL buffer pH 8.3;
Screen: PACT (C3), 0.1M MMT buffer pH 9.0, 25% (v/v) PEG 1500, VAPOR DIFFUSION, SITTING DROP, temperature 295K
Crystal Properties Matthews coefficient Solvent content 1.86 33.98
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 40.927 α = 90 b = 74.267 β = 91.9 c = 47.382 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 300 mm CCD Mirrors 2013-10-14 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 21-ID-D 0.97911 APS 21-ID-D
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.5 30 99.5 0.086 0.086 19.4 3.8 44692 44692 -3 18.6
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.5 1.53 98.7 0.57 0.57 2.4 3.7 2214
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.502 29.22 42391 42391 2254 98.87 0.16283 0.16283 0.16098 0.1612 0.19709 0.1972 RANDOM 22.334
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.58 0.08 0.61 -0.04
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.171 r_dihedral_angle_4_deg 11.146 r_dihedral_angle_3_deg 9.399 r_long_range_B_refined 6.072 r_long_range_B_other 5.996 r_dihedral_angle_1_deg 3.592 r_scangle_other 3.421 r_scbond_it 2.206 r_scbond_other 2.204 r_mcangle_other 1.859
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.171 r_dihedral_angle_4_deg 11.146 r_dihedral_angle_3_deg 9.399 r_long_range_B_refined 6.072 r_long_range_B_other 5.996 r_dihedral_angle_1_deg 3.592 r_scangle_other 3.421 r_scbond_it 2.206 r_scbond_other 2.204 r_mcangle_other 1.859 r_mcangle_it 1.858 r_angle_refined_deg 1.523 r_mcbond_it 1.182 r_mcbond_other 1.178 r_angle_other_deg 0.695 r_chiral_restr 0.092 r_gen_planes_refined 0.018 r_gen_planes_other 0.017 r_bond_refined_d 0.01 r_bond_other_d 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2618 Nucleic Acid Atoms Solvent Atoms 289 Heterogen Atoms 1
Software Software Software Name Purpose Blu-Ice data collection SHELXS phasing REFMAC refinement HKL-3000 data reduction HKL-3000 data scaling