4H8F

Crystal structure of a parallel 4-helix coiled coil CC-Hex-II- 22


X-RAY DIFFRACTION

Starting Model(s)

Initial Refinement Model(s)
TypeSourceAccession CodeDetails
experimental modelPDB 3R46PDB ENTRY 3R46

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP8.529125 % tert-butanol and 100 mM Tris pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 291K
Crystal Properties
Matthews coefficientSolvent content
3.6766.52

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 46.67α = 90
b = 46.67β = 90
c = 94.06γ = 90
Symmetry
Space GroupP 41 2 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-rayPIXELPSI PILATUS 6M2011-08-22MSINGLE WAVELENGTH
21x-rayPIXELPSI PILATUS 6M2011-08-22MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONDIAMOND BEAMLINE I240.97DiamondI24
2SYNCHROTRONDIAMOND BEAMLINE I241.7DiamondI24

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.8846.790468847

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUTPDB ENTRY 3R461.8846.678847837242297.570.208780.20720.24324RANDOM32.497
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.590.59-1.19
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg43.322
r_dihedral_angle_3_deg14.552
r_scangle_it8.72
r_scbond_it5.127
r_dihedral_angle_1_deg5.061
r_mcangle_it2.811
r_mcbond_it1.767
r_angle_refined_deg1.241
r_chiral_restr0.102
r_bond_refined_d0.014
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg43.322
r_dihedral_angle_3_deg14.552
r_scangle_it8.72
r_scbond_it5.127
r_dihedral_angle_1_deg5.061
r_mcangle_it2.811
r_mcbond_it1.767
r_angle_refined_deg1.241
r_chiral_restr0.102
r_bond_refined_d0.014
r_gen_planes_refined0.013
r_bond_other_d
r_angle_other_deg
r_dihedral_angle_4_deg
r_gen_planes_other
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms478
Nucleic Acid Atoms
Solvent Atoms72
Heterogen Atoms21

Software

Software
Software NamePurpose
REFMACrefinement
PHENIXrefinement