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Structure of Regulator Protein SCO3201 from Streptomyces coelicolor
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 5 HANGING DROP VAPOR DIFFUSION 0.1 M (NH4)H2PO4, 0.1 M TRIS/HCL PH 5.0
Crystal Properties Matthews coefficient Solvent content 2.52 51.3
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 54.68 α = 90 b = 79.63 β = 90 c = 95.98 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M MIRRORS 2013-06-06 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON BESSY BEAMLINE 14.1 BESSY 14.1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.1 61.3 99.9 0.06 12.1 5.5 25127 -3 51
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.1 2.21 99.9 0.77 2.1 5.7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT NONE 2.1 61.28 23803 1282 99.84 0.22922 0.22699 0.2361 0.26893 0.2748 RANDOM 67.899
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 2.84 -3.03 0.19
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.224 r_dihedral_angle_4_deg 22.107 r_dihedral_angle_3_deg 17.491 r_dihedral_angle_1_deg 5.575 r_mcangle_it 3.719 r_scbond_it 3.478 r_mcbond_it 2.722 r_mcbond_other 2.721 r_angle_refined_deg 1.685 r_angle_other_deg 0.854
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.224 r_dihedral_angle_4_deg 22.107 r_dihedral_angle_3_deg 17.491 r_dihedral_angle_1_deg 5.575 r_mcangle_it 3.719 r_scbond_it 3.478 r_mcbond_it 2.722 r_mcbond_other 2.721 r_angle_refined_deg 1.685 r_angle_other_deg 0.854 r_chiral_restr 0.087 r_bond_refined_d 0.014 r_gen_planes_refined 0.008 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcangle_other r_scbond_other r_scangle_it r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2872 Nucleic Acid Atoms Solvent Atoms 31 Heterogen Atoms 5
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction SCALA data scaling SHELX phasing