☰ Navigation Tabs
Structural basis of DNA loop recognition by Endonuclease V
Crystallization Crystal Properties Matthews coefficient Solvent content 3.04 59.22
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 55.231 α = 90 b = 135.37 β = 90 c = 194.993 γ = 90
Symmetry Space Group I 2 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 225 mm CCD M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON BESSY BEAMLINE 14.1 BESSY 14.1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.75 60 99.1 0.13 10.6 3.9 19328
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.75 2.9 95.6 0.45 2.1 3.5
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION OTHER THROUGHOUT 2.75 60 17361 843 88.9 0.2274 0.2274 0.2187 0.2906 0.2787 RANDOM 48.6
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -33.456 28.833 4.623
RMS Deviations Key Refinement Restraint Deviation c_dihedral_angle_d 23.45 c_scangle_it 2.8 c_mcangle_it 2.18 c_scbond_it 1.74 c_angle_deg 1.349 c_mcbond_it 1.27 c_improper_angle_d 1.204 c_bond_d 0.0073 c_bond_d_na c_bond_d_prot
RMS Deviations Key Refinement Restraint Deviation c_dihedral_angle_d 23.45 c_scangle_it 2.8 c_mcangle_it 2.18 c_scbond_it 1.74 c_angle_deg 1.349 c_mcbond_it 1.27 c_improper_angle_d 1.204 c_bond_d 0.0073 c_bond_d_na c_bond_d_prot c_angle_d c_angle_d_na c_angle_d_prot c_angle_deg_na c_angle_deg_prot c_dihedral_angle_d_na c_dihedral_angle_d_prot c_improper_angle_d_na c_improper_angle_d_prot
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3580 Nucleic Acid Atoms 629 Solvent Atoms 79 Heterogen Atoms 2
Software Software Software Name Purpose CNS refinement MOSFLM data reduction SCALA data scaling CNS phasing