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Crystal Structure of Cytochrome P450revI
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 7.5 298 PEG3350, Tartrate, pH 7.5, vapor diffusion, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.34 47.44
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 52.779 α = 90 b = 73.472 β = 112.11 c = 58.305 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 210 2008-04-10 SINGLE WAVELENGTH 2 1 x-ray 100 CCD ADSC QUANTUM 210 2008-04-18 MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SPRING-8 BEAMLINE BL40B2 0.9300 SPring-8 BL40B2 2 SYNCHROTRON SPRING-8 BEAMLINE BL44B2 1.73819, 1.74069, 1.71660 SPring-8 BL44B2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1,2 1.35 50 99.9 81049 81049 -3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1,2 1.4 1.4 100
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 1.4 27.01 81016 81016 4061 99.71 0.174 0.174 0.1732 0.1719 0.1884 0.1869 RANDOM 11.792
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.44 0.27 -0.42 0.18
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 27.651 r_dihedral_angle_4_deg 16.519 r_dihedral_angle_3_deg 10.939 r_dihedral_angle_1_deg 4.933 r_scangle_it 2.335 r_scbond_it 1.42 r_angle_refined_deg 1.161 r_mcangle_it 0.866 r_mcbond_it 0.436 r_chiral_restr 0.069
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 27.651 r_dihedral_angle_4_deg 16.519 r_dihedral_angle_3_deg 10.939 r_dihedral_angle_1_deg 4.933 r_scangle_it 2.335 r_scbond_it 1.42 r_angle_refined_deg 1.161 r_mcangle_it 0.866 r_mcbond_it 0.436 r_chiral_restr 0.069 r_gen_planes_refined 0.006 r_bond_refined_d 0.005
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3090 Nucleic Acid Atoms Solvent Atoms 391 Heterogen Atoms 122
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling SOLVE phasing RESOLVE phasing REFMAC refinement PDB_EXTRACT data extraction HKL-2000 data collection HKL-2000 data reduction HKL-2000 data scaling