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The Structure of a Pseudoazurin From Sinorhizobium meliltoi
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 8 293 PEG MME 2000, potassium bromide, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.12 42.02
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 35.627 α = 90 b = 53.494 β = 90 c = 59.921 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315r 2011-05-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON AUSTRALIAN SYNCHROTRON BEAMLINE MX2 0.954 Australian Synchrotron MX2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 50 100 0.181 4.5 7.1 8214 8214 -3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2 2.07 100 0.917 7.2 788
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2 30.62 8129 783 99.36 0.2075 0.2019 0.2613 0.2459 RANDOM 28.1554
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 4.04 -2.16 -1.88
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 28.144 r_dihedral_angle_4_deg 15.874 r_dihedral_angle_3_deg 9.412 r_scangle_it 7.284 r_scbond_it 4.841 r_dihedral_angle_1_deg 4.791 r_mcangle_it 2.172 r_mcbond_it 1.287 r_angle_refined_deg 0.81 r_angle_other_deg 0.705
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 28.144 r_dihedral_angle_4_deg 15.874 r_dihedral_angle_3_deg 9.412 r_scangle_it 7.284 r_scbond_it 4.841 r_dihedral_angle_1_deg 4.791 r_mcangle_it 2.172 r_mcbond_it 1.287 r_angle_refined_deg 0.81 r_angle_other_deg 0.705 r_mcbond_other 0.316 r_chiral_restr 0.048 r_bond_refined_d 0.004 r_gen_planes_refined 0.003 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 931 Nucleic Acid Atoms Solvent Atoms 63 Heterogen Atoms 7
Software Software Software Name Purpose SCALEPACK data scaling REFMAC refinement PDB_EXTRACT data extraction PHASER phasing