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Chronobacterium ammoiniagenes apo-ACPS structure
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 EVAPORATION 6.5 100 mM MES buffer pH 6.5, 0.2 M ammonium sulfate, 30% PEG MME 5K, EVAPORATION
Crystal Properties Matthews coefficient Solvent content 2.3 46.46
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 51.399 α = 90 b = 59.002 β = 90 c = 153.561 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 120 CCD ADSC QUANTUM 4 1999-06-10 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 14-ID-B 0.9792, 0.97906, 0.96380 APS 14-ID-B
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.48 30 94.7 0.05 17.35 16681 16681
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.48 2.5 75.9 4.6 0.76
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 2.5 30 15717 842 98.37 0.20811 0.20483 0.2152 0.2682 0.2742 RANDOM 30.139
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.39 1.12 -0.74
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 8.349 r_scangle_it 6.074 r_scbond_it 3.647 r_mcangle_it 2.641 r_angle_refined_deg 2.57 r_mcbond_it 1.449 r_angle_other_deg 1.274 r_symmetry_vdw_other 0.327 r_nbd_other 0.261 r_symmetry_vdw_refined 0.25
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 8.349 r_scangle_it 6.074 r_scbond_it 3.647 r_mcangle_it 2.641 r_angle_refined_deg 2.57 r_mcbond_it 1.449 r_angle_other_deg 1.274 r_symmetry_vdw_other 0.327 r_nbd_other 0.261 r_symmetry_vdw_refined 0.25 r_chiral_restr 0.231 r_nbd_refined 0.221 r_xyhbond_nbd_refined 0.179 r_symmetry_hbond_refined 0.127 r_nbtor_other 0.108 r_bond_refined_d 0.031 r_gen_planes_refined 0.011 r_gen_planes_other 0.007 r_bond_other_d 0.004 r_dihedral_angle_2_deg r_dihedral_angle_3_deg r_dihedral_angle_4_deg r_nbtor_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3225 Nucleic Acid Atoms Solvent Atoms 73 Heterogen Atoms 20
Software Software Software Name Purpose ADSC data collection SOLVE phasing REFMAC refinement HKL-2000 data reduction SCALEPACK data scaling