☰ Navigation Tabs
Crystal Structure of carboxy-terminus of PFC0420w.
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 4.2 293 22 % PEG 3350, 0.1 M NaAcet pH 4.2, 10 mM CaCl2, 2 mM TCEP, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 1.8 31.71
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 50.469 α = 90 b = 50.469 β = 90 c = 108.656 γ = 120
Symmetry Space Group P 31 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 225 mm CCD 2009-09-10 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON CLSI BEAMLINE 08ID-1 .97920 CLSI 08ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.15 20 98.2 0.078 0.086 11.8 9 57907 56865 9.5
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.15 1.17 77.6 0.547 0.498 1.57 2.1 2193
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.15 16.73 57753 56691 2876 98.16 0.152 0.152 0.15 0.1578 0.186 0.1905 RANDOM 16.38
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.04 0.02 0.04 -0.06
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.434 r_dihedral_angle_4_deg 16.855 r_dihedral_angle_3_deg 14.273 r_scangle_it 8.038 r_scbond_it 5.773 r_dihedral_angle_1_deg 4.963 r_mcangle_it 3.791 r_mcbond_it 2.637 r_rigid_bond_restr 2.519 r_angle_refined_deg 2.404
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.434 r_dihedral_angle_4_deg 16.855 r_dihedral_angle_3_deg 14.273 r_scangle_it 8.038 r_scbond_it 5.773 r_dihedral_angle_1_deg 4.963 r_mcangle_it 3.791 r_mcbond_it 2.637 r_rigid_bond_restr 2.519 r_angle_refined_deg 2.404 r_angle_other_deg 1.29 r_mcbond_other 0.967 r_chiral_restr 0.139 r_bond_refined_d 0.028 r_gen_planes_refined 0.011 r_bond_other_d 0.003 r_gen_planes_other 0.003
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1442 Nucleic Acid Atoms Solvent Atoms 233 Heterogen Atoms 27
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling REFMAC refinement PDB_EXTRACT data extraction CLS_CMCF-1 data collection BALBES phasing