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Fitting of the gp6 crystal structure into 3D cryo-EM reconstruction of bacteriophage T4 dome-shaped baseplate
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 3H2T
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 12
Sample bacteriophage T4 dome-shaped baseplate Sample Components ring of 12 molecules of gene product 6
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument Cryogen Name ETHANE Sample Vitrification Details
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 945 Reported Resolution (Å) 12 Resolution Method FSC 0.5 CUT-OFF Other Details Refinement Type Symmetry Type POINT Point Symmetry C6
Map-Model Fitting and Refinement Id 1 (3H2T) Refinement Space REAL Refinement Protocol Refinement Target Overall B Value Fitting Procedure Details
Data Acquisition Detector Type KODAK SO-163 FILM Electron Dose (electrons/Å**2) 25
Imaging Experiment 1 Date of Experiment 2001-01-30 Temperature (Kelvin) Microscope Model FEI/PHILIPS CM300FEG/T Minimum Defocus (nm) 1200 Maximum Defocus (nm) 5000 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS Imaging Mode BRIGHT FIELD Specimen Holder Model GATAN LIQUID NITROGEN Nominal Magnification 45000 Calibrated Magnification 47000 Source FIELD EMISSION GUN Acceleration Voltage (kV) 300 Imaging Details
EM Software Task Software Package Version MODEL FITTING SITUS COLORES RECONSTRUCTION SPIDER