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X-ray crystal structure of a type III pentaketide synthase from Neurospora crassa
Crystallization Crystal Properties Matthews coefficient Solvent content 2.33 47.14
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 68.867 α = 90 b = 105.925 β = 90.1 c = 104.124 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 21-ID-G APS 21-ID-G
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 25 92963
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2 25 92963 4891 97.11 0.17616 0.17361 0.1758 0.22476 0.2283 RANDOM 30.981
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.57 -0.2 -2.8 1.23
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.961 r_dihedral_angle_4_deg 18.419 r_dihedral_angle_3_deg 14.74 r_dihedral_angle_1_deg 5.762 r_scangle_it 3.061 r_scbond_it 1.975 r_angle_refined_deg 1.29 r_mcangle_it 1.097 r_mcbond_it 0.656 r_nbtor_refined 0.295
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.961 r_dihedral_angle_4_deg 18.419 r_dihedral_angle_3_deg 14.74 r_dihedral_angle_1_deg 5.762 r_scangle_it 3.061 r_scbond_it 1.975 r_angle_refined_deg 1.29 r_mcangle_it 1.097 r_mcbond_it 0.656 r_nbtor_refined 0.295 r_symmetry_vdw_refined 0.289 r_nbd_refined 0.205 r_xyhbond_nbd_refined 0.145 r_symmetry_hbond_refined 0.138 r_chiral_restr 0.087 r_bond_refined_d 0.011 r_gen_planes_refined 0.004 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 11428 Nucleic Acid Atoms Solvent Atoms 805 Heterogen Atoms 44
Software Software Software Name Purpose REFMAC refinement