☰ Navigation Tabs
HUMAN BONE MORPHOGENETIC PROTEIN-2 (BMP-2)
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1TFG
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 5.4 CRYSTALLIZATION CONDITIONS: PROTEIN WAS CRYSTALLIZED FROM 100 MM LITHIUM
SULFATE, 12% TERT-BUTANOL, 50 MM CITRATE, PH 5.4
Crystal Properties Matthews coefficient Solvent content 3 59
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 91.44 α = 90 b = 91.44 β = 90 c = 107.75 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 AREA DETECTOR SIEMENS COLLIMATOR 1997-11-30 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU RU200
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.7 10 94.6 0.041 24.2 3 4647 60.3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.7 2.8 82.2 0.123 5.4 2.2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1TFG 2.7 25 4647 296 94.6 0.242 0.255 0.278 RANDOM 37
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.85 4.1 0.85 -1.7
RMS Deviations Key Refinement Restraint Deviation x_dihedral_angle_d 23.5 x_mcangle_it 2.55 x_scangle_it 2.47 x_scbond_it 1.51 x_mcbond_it 1.41 x_angle_deg 1.3 x_improper_angle_d 0.99 x_bond_d 0.007 x_bond_d_na x_bond_d_prot
RMS Deviations Key Refinement Restraint Deviation x_dihedral_angle_d 23.5 x_mcangle_it 2.55 x_scangle_it 2.47 x_scbond_it 1.51 x_mcbond_it 1.41 x_angle_deg 1.3 x_improper_angle_d 0.99 x_bond_d 0.007 x_bond_d_na x_bond_d_prot x_angle_d x_angle_d_na x_angle_d_prot x_angle_deg_na x_angle_deg_prot x_dihedral_angle_d_na x_dihedral_angle_d_prot x_improper_angle_d_na x_improper_angle_d_prot
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 833 Nucleic Acid Atoms Solvent Atoms 33 Heterogen Atoms 8
Software Software Software Name Purpose XDS data scaling XDS data reduction AMoRE phasing CNS refinement