☰ Navigation Tabs
Structure of HRDC domain from human Bloom syndrome protein, BLM
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 0.5mM [U-98% 13C; U-98% 15N] BLM-1, 50mM TRIS-2, 100mM sodium chloride-3 90% H2O/10% D2O 100 7.5 ambient 303 2 3D HNCACB 0.5mM [U-98% 13C; U-98% 15N] BLM-1, 50mM TRIS-2, 100mM sodium chloride-3 90% H2O/10% D2O 100 7.5 ambient 303 3 3D CBCA(CO)NH 0.5mM [U-98% 13C; U-98% 15N] BLM-1, 50mM TRIS-2, 100mM sodium chloride-3 90% H2O/10% D2O 100 7.5 ambient 303 4 3D HNCA 0.5mM [U-98% 13C; U-98% 15N] BLM-1, 50mM TRIS-2, 100mM sodium chloride-3 90% H2O/10% D2O 100 7.5 ambient 303 5 3D HN(CO)CA 0.5mM [U-98% 13C; U-98% 15N] BLM-1, 50mM TRIS-2, 100mM sodium chloride-3 90% H2O/10% D2O 100 7.5 ambient 303 6 3D C(CO)NH 0.5mM [U-98% 13C; U-98% 15N] BLM-1, 50mM TRIS-2, 100mM sodium chloride-3 90% H2O/10% D2O 100 7.5 ambient 303 7 3D H(CCO)NH 0.5mM [U-98% 13C; U-98% 15N] BLM-1, 50mM TRIS-2, 100mM sodium chloride-3 90% H2O/10% D2O 100 7.5 ambient 303 8 4D H(CCO)NH 0.5mM [U-98% 13C; U-98% 15N] BLM-1, 50mM TRIS-2, 100mM sodium chloride-3 90% H2O/10% D2O 100 7.5 ambient 303 9 3D HNHB 1mM [U-100% 15N] BLM-4, 50mM d11-TRIS-5, 100mM sodium chloride-6 90% H2O/10% D2O 100 7.5 ambient 303 10 3D HN(CO)HB 0.5mM [U-98% 13C; U-98% 15N] BLM-1, 50mM TRIS-2, 100mM sodium chloride-3 90% H2O/10% D2O 100 7.5 ambient 303 11 3D 1H-15N NOESY 1mM [U-100% 15N] BLM-4, 50mM d11-TRIS-5, 100mM sodium chloride-6 90% H2O/10% D2O 100 7.5 ambient 303 12 3D 1H-13C NOESY 1mM [U-98% 13C; U-98% 15N] BLM-7, 50mM d11-TRIS-8, 100mM sodium chloride-9 100% D2O 100 7.5 ambient 303
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 600
NMR Refinement Method Details Software simulated annealing Sparky
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 chemical shift assignment Sparky 3.113 Goddard 2 peak picking Sparky 3.113 Goddard 3 processing NMRPipe 5.0 Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 4 structure solution CYANA 3.0 Guntert, Mumenthaler and Wuthrich 5 refinement CNS 1.1 Brunger, Adams, Clore, Gros, Nilges and Read