2RRD
Structure of HRDC domain from human Bloom syndrome protein, BLM
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | HRDC-like | 8055805 | 3000132 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.150.80 | Mainly Alpha | Orthogonal Bundle | DNA polymerase | domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00570 | HRDC domain (HRDC) | HRDC domain | The HRDC (Helicase and RNase D C-terminal) domain has a putative role in nucleic acid binding. Mutations in the HRDC domain cause human disease. It is interesting to note that the RecQ helicase in Deinococcus radiodurans has three tandem HRDC domains ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR002121 | HRDC domain | Domain | |
IPR032437 | RecQ-like DNA helicase BLM, N-terminal domain | Domain | |
IPR032439 | RecQ-like DNA helicase BLM, BDHCT-box associated domain | Domain | |
IPR012532 | BDHCT | Domain | |
IPR011545 | DEAD/DEAH box helicase domain | Domain | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily | |
IPR010997 | HRDC-like superfamily | Homologous Superfamily | |
IPR001650 | Helicase, C-terminal domain-like | Domain | |
IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily | |
IPR014001 | Helicase superfamily 1/2, ATP-binding domain | Domain | |
IPR036390 | Winged helix DNA-binding domain superfamily | Homologous Superfamily | |
IPR004589 | DNA helicase, ATP-dependent, RecQ type | Family | |
IPR032284 | ATP-dependent DNA helicase RecQ, zinc-binding domain | Domain | |
IPR002464 | DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site | Conserved Site | |
IPR018982 | RQC domain | Domain | |
IPR044876 | HRDC domain superfamily | Homologous Superfamily |