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Structure of sugar modified epidermal growth factor-like repeat 12 of mouse Notch-1 receptor
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D DQF-COSY 0.55mM NEUROGENIC LOCUS NOTCH HOMOLOG PROTEIN 1; 0.55mM SUGAR (2-MER); 90% H2O/10% D2O 90% H2O/10% D2O 0 5.3 AMBIENT 300 2 2D 1H-1H TOCSY 0.55mM NEUROGENIC LOCUS NOTCH HOMOLOG PROTEIN 1; 0.55mM SUGAR (2-MER); 90% H2O/10% D2O 90% H2O/10% D2O 0 5.3 AMBIENT 300 3 2D 1H-1H NOESY 0.55mM NEUROGENIC LOCUS NOTCH HOMOLOG PROTEIN 1; 0.55mM SUGAR (2-MER); 90% H2O/10% D2O 90% H2O/10% D2O 0 5.3 AMBIENT 300 4 2D 1H-1H TOCSY 0.55mM NEUROGENIC LOCUS NOTCH HOMOLOG PROTEIN 1; 0.55mM SUGAR (2-MER); 100% D2O 100% D2O 0 5.3 AMBIENT 300
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 600
NMR Refinement Method Details Software DGSA-distance geometry simulated annealing Both sugar rings were fixed in chair conformation. CNS
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 500 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Additional NMR Experimental Information Details The structure was determined using a combination NOE and D2O exchange experiment.
Computation: NMR Software # Classification Version Software Name Author 1 refinement CNS 1.1