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MitoNEET is a uniquely folded 2Fe-2S outer mitochondrial membrane protein stabilized by pioglitazone
Crystallization Crystal Properties Matthews coefficient Solvent content 1.91 35.73
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 46.806 α = 90 b = 49.621 β = 90 c = 59.006 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 325 mm CCD 2007-03-22 M MAD 2 1 x-ray 100 CCD MARMOSAIC 325 mm CCD 2007-04-10 M SINGLE WAVELENGTH 3 1
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRL BEAMLINE BL11-1 0.9794 SSRL BL11-1 2 SYNCHROTRON SSRL BEAMLINE BL9-2 1.7374, 1.3624, 1.7418 SSRL BL9-2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1,2 1.5 38 94.7 0.058 30.92 21479 27.683
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1,2 1.5 1.55 66.8 0.754 3.2 1392
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 1.5 38 21479 1081 95.25 0.184 0.182 0.2014 0.223 RANDOM 33.279
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.95 1.35 -2.3
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 20.957 r_dihedral_angle_3_deg 11.99 r_dihedral_angle_1_deg 6.444 r_dihedral_angle_4_deg 5.394 r_scangle_it 4.654 r_scbond_it 3.745 r_mcangle_it 2.309 r_mcbond_it 1.843 r_angle_refined_deg 1.717 r_angle_other_deg 0.92
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 20.957 r_dihedral_angle_3_deg 11.99 r_dihedral_angle_1_deg 6.444 r_dihedral_angle_4_deg 5.394 r_scangle_it 4.654 r_scbond_it 3.745 r_mcangle_it 2.309 r_mcbond_it 1.843 r_angle_refined_deg 1.717 r_angle_other_deg 0.92 r_mcbond_other 0.528 r_symmetry_vdw_other 0.204 r_nbd_refined 0.182 r_nbd_other 0.172 r_xyhbond_nbd_refined 0.17 r_nbtor_refined 0.169 r_symmetry_hbond_refined 0.135 r_symmetry_vdw_refined 0.116 r_nbtor_other 0.083 r_chiral_restr 0.08 r_bond_refined_d 0.012 r_gen_planes_refined 0.006 r_bond_other_d 0.002 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1028 Nucleic Acid Atoms Solvent Atoms 128 Heterogen Atoms 8
Software Software Software Name Purpose XSCALE data scaling SOLVE phasing RESOLVE phasing REFMAC refinement PDB_EXTRACT data extraction Blu-Ice data collection MOSFLM data reduction XDS data reduction SCALA data scaling