2JR3
Antibacterial Peptide from Eggshell Matrix: Structure and Self-assembly of beta-defensin Like Peptide from the Chinese Soft-shelled Turtle Eggshell
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-1H NOESY | 1 mM Pelovaterin | 90% H2O/10% D2O | 4.5 | AMBIENT | 308 | ||
2 | 2D 1H-1H TOCSY | 1 mM Pelovaterin | 90% H2O/10% D2O | 4.5 | AMBIENT | 308 | ||
3 | 2D DQF-COSY | 1 mM Pelovaterin | 90% H2O/10% D2O | 4.5 | AMBIENT | 308 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 800 |
2 | Bruker | AVANCE | 500 |
NMR Refinement | ||
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Method | Details | Software |
torsion angle dynamics | CYANA |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 200 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | structure solution | CYANA | 2.1 | P.GUNTERT ET AL. |
2 | refinement | CYANA | 2.1 | P.GUNTERT ET AL. |
3 | data analysis | Sparky | 3.110 | Goddard |
4 | peak picking | Sparky | 3.110 | Goddard |