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Structure of human Butyrylcholinesterase in complex with 10mM HgCl2
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1P0I PDB ENTRY 1P0I
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.5 298 AMMONIUM SULFATE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, PH 6.5, VAPOR DIFFUSION, HANGING DROP,TEMPERATURE 298.0K
Crystal Properties Matthews coefficient Solvent content 2.82 55.99
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 153.76 α = 90 b = 153.76 β = 90 c = 128.58 γ = 90
Symmetry Space Group I 4 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE RIGAKU IMAGE PLATE 2005-01-26 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU R-AXIS IV
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.75 20 93.9 0.07 20.97 4.36 35972 4.29 31.4
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.75 2.9 97.8 0.42 4.29 4.51
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 1P0I 2.75 19.39 35972 1789 93.9 0.184 0.184 0.1885 0.231 0.2286 RANDOM 56.9
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -6.86 -6.86 13.71
RMS Deviations Key Refinement Restraint Deviation c_dihedral_angle_d 23.1 c_scangle_it 2.98 c_mcangle_it 2.61 c_scbond_it 1.84 c_angle_deg 1.6 c_mcbond_it 1.48 c_improper_angle_d 0.95 c_bond_d 0.01 c_bond_d_na c_bond_d_prot
RMS Deviations Key Refinement Restraint Deviation c_dihedral_angle_d 23.1 c_scangle_it 2.98 c_mcangle_it 2.61 c_scbond_it 1.84 c_angle_deg 1.6 c_mcbond_it 1.48 c_improper_angle_d 0.95 c_bond_d 0.01 c_bond_d_na c_bond_d_prot c_angle_d c_angle_d_na c_angle_d_prot c_angle_deg_na c_angle_deg_prot c_dihedral_angle_d_na c_dihedral_angle_d_prot c_improper_angle_d_na c_improper_angle_d_prot
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4176 Nucleic Acid Atoms Solvent Atoms 365 Heterogen Atoms 171
Software Software Software Name Purpose CNS refinement XDS data reduction XSCALE data scaling CNS phasing