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Structure of the catalytic domain of mouse Manic Fringe
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 6.5 0.2 M POTASSIUM SULFATE, 20% PEG 3350, pH 6.50
Crystal Properties Matthews coefficient Solvent content 2.08 40.8
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 162.6 α = 90 b = 41.4 β = 90 c = 39.8 γ = 90
Symmetry Space Group P 21 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH 2005-05-30 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID14-3 ESRF ID14-3
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.8 81.4 99.5 0.06 13.2 4.4 25066 3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.8 1.9 97.9 0.44 2.9 3.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.8 81.38 23794 1273 97.5 0.195 0.194 0.1965 0.219 0.2217 RANDOM 22.24
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.96 0.67 0.29
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36 r_dihedral_angle_3_deg 15.483 r_dihedral_angle_4_deg 12.149 r_dihedral_angle_1_deg 6.734 r_scangle_it 4.89 r_scbond_it 3.291 r_mcangle_it 1.793 r_angle_refined_deg 1.739 r_angle_other_deg 1.178 r_mcbond_it 0.926
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36 r_dihedral_angle_3_deg 15.483 r_dihedral_angle_4_deg 12.149 r_dihedral_angle_1_deg 6.734 r_scangle_it 4.89 r_scbond_it 3.291 r_mcangle_it 1.793 r_angle_refined_deg 1.739 r_angle_other_deg 1.178 r_mcbond_it 0.926 r_symmetry_vdw_other 0.279 r_symmetry_vdw_refined 0.229 r_symmetry_hbond_refined 0.225 r_nbd_refined 0.222 r_nbd_other 0.202 r_nbtor_refined 0.173 r_xyhbond_nbd_refined 0.151 r_chiral_restr 0.13 r_nbtor_other 0.086 r_bond_refined_d 0.019 r_bond_other_d 0.007 r_gen_planes_refined 0.007 r_gen_planes_other 0.001 r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1942 Nucleic Acid Atoms Solvent Atoms 85 Heterogen Atoms 6
Software Software Software Name Purpose REFMAC refinement XDS data reduction XDS data scaling PHENIX phasing HYSS phasing autoSHARP phasing