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Crystal structure of phenylacetaldehyde derived R-carbinolamine adduct of aromatic amine dehydrogenase
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 6 295 PEG 2000 mme, ammonium sulphate, sodium cocadylate, pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 295K
Crystal Properties Matthews coefficient Solvent content 2.34 47.35
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 70.524 α = 90 b = 88.451 β = 90.45 c = 80.164 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2006-07-25 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID29 0.9 ESRF ID29
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.35 15 99 0.084 10.2 215552
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.35 1.42 98 0.328 3.2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION FOURIER SYNTHESIS THROUGHOUT 1.35 15 212521 212521 10672 98.8 0.153 0.152 0.1525 0.175 0.1756 RANDOM 11.825
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.19 -0.63 -0.31 0.5
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.838 r_dihedral_angle_4_deg 11.944 r_dihedral_angle_3_deg 11.318 r_dihedral_angle_1_deg 7.156 r_scangle_it 2.958 r_scbond_it 1.907 r_angle_refined_deg 1.412 r_mcangle_it 1.299 r_angle_other_deg 0.81 r_mcbond_it 0.81
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.838 r_dihedral_angle_4_deg 11.944 r_dihedral_angle_3_deg 11.318 r_dihedral_angle_1_deg 7.156 r_scangle_it 2.958 r_scbond_it 1.907 r_angle_refined_deg 1.412 r_mcangle_it 1.299 r_angle_other_deg 0.81 r_mcbond_it 0.81 r_symmetry_vdw_refined 0.281 r_symmetry_vdw_other 0.213 r_mcbond_other 0.209 r_nbd_refined 0.199 r_nbd_other 0.193 r_nbtor_refined 0.179 r_symmetry_hbond_refined 0.17 r_xyhbond_nbd_refined 0.147 r_nbtor_other 0.097 r_chiral_restr 0.089 r_xyhbond_nbd_other 0.078 r_bond_refined_d 0.012 r_gen_planes_refined 0.007 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 7484 Nucleic Acid Atoms Solvent Atoms 1468 Heterogen Atoms 18
Software Software Software Name Purpose REFMAC refinement PDB_EXTRACT data extraction MOSFLM data reduction CCP4 data scaling