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Structure of the transcription factor Gfh1.
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 6.5 277 8% PEG800, 33mM ZnAc, 17mM NaCacodylate, 0.85M NaCl, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K, pH 6.50
Crystal Properties Matthews coefficient Solvent content 2.79 55.98
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 59.291 α = 90 b = 59.291 β = 90 c = 218.876 γ = 90
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE RIGAKU RAXIS IV MIRRORS 2005-09-14 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU MICROMAX-007 HF
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.4 30 91.4 0.04 35.6 7.8 29039 -1 50
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.4 2.48 58.8 0.482 8.2 4.2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MIR THROUGHOUT 2.4 30 29361 29039 1641 98.9 0.206 0.206 0.245 0.2756 RANDOM 58.1
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -4.382 -4.382 8.765
RMS Deviations Key Refinement Restraint Deviation c_scangle_it 2.68 c_mcangle_it 2.64 c_scbond_it 1.59 c_angle_deg 1.45 c_mcbond_it 1.45 c_bond_d 0.009 c_bond_d_na c_bond_d_prot c_angle_d c_angle_d_na
RMS Deviations Key Refinement Restraint Deviation c_scangle_it 2.68 c_mcangle_it 2.64 c_scbond_it 1.59 c_angle_deg 1.45 c_mcbond_it 1.45 c_bond_d 0.009 c_bond_d_na c_bond_d_prot c_angle_d c_angle_d_na c_angle_d_prot c_angle_deg_na c_angle_deg_prot c_dihedral_angle_d c_dihedral_angle_d_na c_dihedral_angle_d_prot c_improper_angle_d c_improper_angle_d_na c_improper_angle_d_prot
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4808 Nucleic Acid Atoms Solvent Atoms 386 Heterogen Atoms 25
Software Software Software Name Purpose HKL-2000 data reduction CCP4 model building CNS refinement HKL-2000 data scaling CCP4 phasing