2EUL | pdb_00002eul

Structure of the transcription factor Gfh1.

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
D	d2euld1	All alpha proteins	Long alpha-hairpin	GreA transcript cleavage protein, N-terminal domain	GreA transcript cleavage protein, N-terminal domain	GreA transcript cleavage protein, N-terminal domain	(Thermus thermophilus HB8 ) [TaxId: 300852 ],	SCOPe (2.08)
D	d2euld2	Alpha and beta proteins (a+b)	FKBP-like	FKBP-like	GreA transcript cleavage factor, C-terminal domain	GreA transcript cleavage factor, C-terminal domain	(Thermus thermophilus HB8 ) [TaxId: 300852 ],	SCOPe (2.08)
C	d2eulc1	All alpha proteins	Long alpha-hairpin	GreA transcript cleavage protein, N-terminal domain	GreA transcript cleavage protein, N-terminal domain	GreA transcript cleavage protein, N-terminal domain	(Thermus thermophilus HB8 ) [TaxId: 300852 ],	SCOPe (2.08)
C	d2eulc2	Alpha and beta proteins (a+b)	FKBP-like	FKBP-like	GreA transcript cleavage factor, C-terminal domain	GreA transcript cleavage factor, C-terminal domain	(Thermus thermophilus HB8 ) [TaxId: 300852 ],	SCOPe (2.08)
B	d2eulb1	All alpha proteins	Long alpha-hairpin	GreA transcript cleavage protein, N-terminal domain	GreA transcript cleavage protein, N-terminal domain	GreA transcript cleavage protein, N-terminal domain	(Thermus thermophilus HB8 ) [TaxId: 300852 ],	SCOPe (2.08)
B	d2eulb2	Alpha and beta proteins (a+b)	FKBP-like	FKBP-like	GreA transcript cleavage factor, C-terminal domain	GreA transcript cleavage factor, C-terminal domain	(Thermus thermophilus HB8 ) [TaxId: 300852 ],	SCOPe (2.08)
A	d2eula1	All alpha proteins	Long alpha-hairpin	GreA transcript cleavage protein, N-terminal domain	GreA transcript cleavage protein, N-terminal domain	GreA transcript cleavage protein, N-terminal domain	(Thermus thermophilus HB8 ) [TaxId: 300852 ],	SCOPe (2.08)
A	d2eula2	Alpha and beta proteins (a+b)	FKBP-like	FKBP-like	GreA transcript cleavage factor, C-terminal domain	GreA transcript cleavage factor, C-terminal domain	(Thermus thermophilus HB8 ) [TaxId: 300852 ],	SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	Seryl_tRNA_N	e2eulD1	A: alpha arrays	X: Urease, gamma-subunit	H: Urease, gamma-subunit	T: Urease, gamma-subunit	F: Seryl_tRNA_N	ECOD (v295.2)
D	HSP90,HATPase_c_3	e2eulD2	A: alpha arrays	X: ETN0001 domain-like	H: ETN0001 domain-like	T: Mss4-like	F: HSP90,HATPase_c_3	ECOD (v295.2)
C	Seryl_tRNA_N	e2eulC1	A: alpha arrays	X: Urease, gamma-subunit	H: Urease, gamma-subunit	T: Urease, gamma-subunit	F: Seryl_tRNA_N	ECOD (v295.2)
C	HSP90,HATPase_c_3	e2eulC2	A: alpha arrays	X: ETN0001 domain-like	H: ETN0001 domain-like	T: Mss4-like	F: HSP90,HATPase_c_3	ECOD (v295.2)
B	Seryl_tRNA_N	e2eulB1	A: alpha arrays	X: Urease, gamma-subunit	H: Urease, gamma-subunit	T: Urease, gamma-subunit	F: Seryl_tRNA_N	ECOD (v295.2)
B	HSP90,HATPase_c_3	e2eulB2	A: alpha arrays	X: ETN0001 domain-like	H: ETN0001 domain-like	T: Mss4-like	F: HSP90,HATPase_c_3	ECOD (v295.2)
A	Seryl_tRNA_N	e2eulA1	A: alpha arrays	X: Urease, gamma-subunit	H: Urease, gamma-subunit	T: Urease, gamma-subunit	F: Seryl_tRNA_N	ECOD (v295.2)
A	HSP90,HATPase_c_3	e2eulA2	A: alpha arrays	X: ETN0001 domain-like	H: ETN0001 domain-like	T: Mss4-like	F: HSP90,HATPase_c_3	ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	1.10.287.180	Mainly Alpha	Orthogonal Bundle	Helix Hairpins	Transcription elongation factor, GreA/GreB, N-terminal domain	CATH (4.3.0)
D	3.10.50.30	Alpha Beta	Roll	Chitinase A	domain 3	CATH (4.3.0)
C	1.10.287.180	Mainly Alpha	Orthogonal Bundle	Helix Hairpins	Transcription elongation factor, GreA/GreB, N-terminal domain	CATH (4.3.0)
C	3.10.50.30	Alpha Beta	Roll	Chitinase A	domain 3	CATH (4.3.0)
B	1.10.287.180	Mainly Alpha	Orthogonal Bundle	Helix Hairpins	Transcription elongation factor, GreA/GreB, N-terminal domain	CATH (4.3.0)
B	3.10.50.30	Alpha Beta	Roll	Chitinase A	domain 3	CATH (4.3.0)
A	1.10.287.180	Mainly Alpha	Orthogonal Bundle	Helix Hairpins	Transcription elongation factor, GreA/GreB, N-terminal domain	CATH (4.3.0)
A	3.10.50.30	Alpha Beta	Roll	Chitinase A	domain 3	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF03449	Transcription elongation factor, N-terminal (GreA_GreB_N)	Transcription elongation factor, N-terminal	This domain adopts a long alpha-hairpin structure.	Domain
A, B, C, D	PF01272	Transcription elongation factor, GreA/GreB, C-term (GreA_GreB)	Transcription elongation factor, GreA/GreB, C-term	This domain has an FKBP-like fold.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	anti-cleavage anti-GreA transcription factor Gfh1	DNA binding binding nucleic acid binding RNA polymerase binding protein binding enzyme binding	RNA metabolic process primary metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process DNA-templated transcription elongation biosynthetic process metabolic process cellular process RNA metabolic process primary metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process DNA-templated transcription elongation biosynthetic process metabolic process cellular process macromolecule metabolic process regulation of cellular process regulation of primary metabolic process regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process regulation of DNA-templated transcription elongation regulation of biological process biological regulation regulation of macromolecule metabolic process regulation of gene expression regulation of macromolecule biosynthetic process regulation of DNA-templated transcription regulation of metabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR022691	Transcription elongation factor, GreA/GreB, N-terminal	Domain
A, B, C, D	IPR023459	Transcription elongation factor GreA/GreB family	Family
A, B, C, D	IPR036805	Transcription elongation factor, GreA/GreB, N-terminal domain superfamily	Homologous Superfamily
A, B, C, D	IPR036953	Transcription elongation factor GreA/GreB, C-terminal domain superfamily	Homologous Superfamily
A, B, C, D	IPR018151	Transcription elongation factor, GreA/GreB, conserved site	Conserved Site
A, B, C, D	IPR001437	Transcription elongation factor, GreA/GreB, C-terminal	Domain