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N-terminal domain of tlg1 complexed with N-terminus of vps51 in distorted conformation
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 5.5 8 MG/ML PROTEIN, 66% SATURATED AMMONIUM SULPHATE, 100 MM NA CITRATE PH 5.5 WITH A 3-FOLD MOLAR EXCESS OF THE PEPTIDE, 20% GLYCEROL FOR FREEZING
Crystal Properties Matthews coefficient Solvent content 2.76 50
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 65.776 α = 90 b = 65.776 β = 90 c = 62.577 γ = 120
Symmetry Space Group P 32 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC CCD 2004-02-14 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID14-4 0.939,0.981 ESRF ID14-4
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.3 41 99.6 0.12 24 21 7108
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.3 2.42 99.1 1 4.1 22
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 2.3 56.8 6770 328 99.2 0.229 0.226 0.236 0.296 RANDOM 41.82
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 2.92 1.46 2.92 -4.38
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.307 r_dihedral_angle_3_deg 17.261 r_dihedral_angle_4_deg 12.183 r_dihedral_angle_1_deg 8.617 r_scangle_it 3.829 r_scbond_it 2.589 r_mcangle_it 1.996 r_angle_refined_deg 1.745 r_mcbond_it 1.614 r_angle_other_deg 1.005
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.307 r_dihedral_angle_3_deg 17.261 r_dihedral_angle_4_deg 12.183 r_dihedral_angle_1_deg 8.617 r_scangle_it 3.829 r_scbond_it 2.589 r_mcangle_it 1.996 r_angle_refined_deg 1.745 r_mcbond_it 1.614 r_angle_other_deg 1.005 r_xyhbond_nbd_refined 0.307 r_symmetry_vdw_refined 0.264 r_symmetry_vdw_other 0.25 r_symmetry_hbond_refined 0.236 r_nbd_refined 0.235 r_nbd_other 0.194 r_nbtor_refined 0.177 r_nbtor_other 0.092 r_chiral_restr 0.087 r_bond_refined_d 0.02 r_gen_planes_refined 0.006 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 979 Nucleic Acid Atoms Solvent Atoms 23 Heterogen Atoms 5
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction SCALA data scaling SHARP phasing